Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h12
         (371 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4254|AAS65221.1|  254|Drosophila melanogaster CG33346-P...    30   0.84 
AE014298-3106|AAF50837.1| 1713|Drosophila melanogaster CG1718-PA...    29   2.6  
BT003552-1|AAO39556.1|  676|Drosophila melanogaster LP12382p pro...    28   3.4  
AE014298-3127|AAF50824.2|  696|Drosophila melanogaster CG1410-PA...    28   3.4  
AY089556-1|AAL90294.1|  819|Drosophila melanogaster LD44201p pro...    28   4.5  
AF017777-7|AAC28402.1|  679|Drosophila melanogaster waclaw protein.    28   4.5  
AE014298-2339|AAF48570.3|  819|Drosophila melanogaster CG13956-P...    28   4.5  
AE014298-2338|AAF48571.2|  819|Drosophila melanogaster CG13956-P...    28   4.5  

>AE014297-4254|AAS65221.1|  254|Drosophila melanogaster CG33346-PA
           protein.
          Length = 254

 Score = 30.3 bits (65), Expect = 0.84
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 184 SWNFVKHKYRGMKKMLKTFTPSRPVLELANRSLRNV 291
           +W  V++  RG K +L   T +  VL+L NRS ++V
Sbjct: 127 NWKIVENWVRGQKDVLNVCTGALGVLDLLNRSQKSV 162


>AE014298-3106|AAF50837.1| 1713|Drosophila melanogaster CG1718-PA
           protein.
          Length = 1713

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -1

Query: 347 MYLLLFVYFLCSVCFCVVRTLRSDRLASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMKGS 168
           +   L +Y + S+CFC +      R AS++    G+ ++ I +IP    +  + D+   S
Sbjct: 333 LVFFLIIYIVSSICFCFMMATFFSR-ASTAAAVTGL-IWFIAYIPYSFTINSYDDLSLSS 390


>BT003552-1|AAO39556.1|  676|Drosophila melanogaster LP12382p
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 272 LASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMK--GSFYPPFTYGAD*EEHDH--SHRNG 105
           L  SS   D   V   + +PL   +  FHD +K   S Y  F+Y    E+H +  SH   
Sbjct: 509 LQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSY----EDHGYHPSHLVR 564

Query: 104 KQIQPNGHNIVEC*LKITSSSRFSG 30
             I  NG  + E   +I   S+ +G
Sbjct: 565 LDIHLNGKPVEEL-CRIVHVSKATG 588


>AE014298-3127|AAF50824.2|  696|Drosophila melanogaster CG1410-PA,
           isoform A protein.
          Length = 696

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 272 LASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMK--GSFYPPFTYGAD*EEHDH--SHRNG 105
           L  SS   D   V   + +PL   +  FHD +K   S Y  F+Y    E+H +  SH   
Sbjct: 529 LQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSY----EDHGYHPSHLVR 584

Query: 104 KQIQPNGHNIVEC*LKITSSSRFSG 30
             I  NG  + E   +I   S+ +G
Sbjct: 585 LDIHLNGKPVEEL-CRIVHVSKATG 608


>AY089556-1|AAL90294.1|  819|Drosophila melanogaster LD44201p
           protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 253 PVLELANRSLRNVRTTQKQTLHKKYTNN 336
           P     N S ++++ T   TLHK+ TNN
Sbjct: 513 PATSTINASSKSIKKTTTTTLHKRTTNN 540


>AF017777-7|AAC28402.1|  679|Drosophila melanogaster waclaw protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 272 LASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMK--GSFYPPFTYGAD*EEHDH--SHRNG 105
           L  SS   D   V   + +PL   +  FHD +K   S Y  F+Y    E+H +  SH   
Sbjct: 529 LQQSSVNIDETRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSY----EDHGYHPSHLVR 584

Query: 104 KQIQPNGHNIVEC*LKITSSSRFSG 30
             I  NG  + E   +I   S+ +G
Sbjct: 585 LDIHLNGKPVEEL-CRIVHVSKATG 608


>AE014298-2339|AAF48570.3|  819|Drosophila melanogaster CG13956-PB,
           isoform B protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 253 PVLELANRSLRNVRTTQKQTLHKKYTNN 336
           P     N S ++++ T   TLHK+ TNN
Sbjct: 513 PATSTINASSKSIKKTTTTTLHKRTTNN 540


>AE014298-2338|AAF48571.2|  819|Drosophila melanogaster CG13956-PA,
           isoform A protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 253 PVLELANRSLRNVRTTQKQTLHKKYTNN 336
           P     N S ++++ T   TLHK+ TNN
Sbjct: 513 PATSTINASSKSIKKTTTTTLHKRTTNN 540


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,324,541
Number of Sequences: 53049
Number of extensions: 355359
Number of successful extensions: 1329
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)