Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h09
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   1.0  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.3  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.3  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +1

Query: 265 ARTHISTTDRDHDVLAGSAREKRLEILERYRHYCFRC 375
           A  +++  DR   ++    R +R+       HY  RC
Sbjct: 70  ASANVAVADRQQSLILAGGRRQRIMWTREMNHYVIRC 106


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 213 IIAAAKTIVLSLRNVALEQILMQSWPYKTNCVFAST 106
           ++  A  I+    +    +++MQSWP K+  ++ +T
Sbjct: 221 VVTTASGIISYPFDTVRRRMMMQSWPCKSEVMYKNT 256


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 213 IIAAAKTIVLSLRNVALEQILMQSWPYKTNCVFAST 106
           ++  A  I+    +    +++MQSWP K+  ++ +T
Sbjct: 221 VVTTASGIISYPFDTVRRRMMMQSWPCKSEVMYKNT 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,548
Number of Sequences: 2352
Number of extensions: 10672
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)