Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2h09
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 61 7e-10
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 33 0.26
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 5.7
U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 28 7.5
U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical pr... 28 7.5
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 203 AAMIPNLSGIISLVGAFSSSALALIFPPLIEIMT-FWPDQLGKNDWKFWKDIVIIVFGVT 379
A +IP+L+ ISL+GAFS +++AL+FPP IE++T + ++L W K+IV++ F
Sbjct: 380 AELIPHLALFISLIGAFSGASMALLFPPCIELLTSYAKNELSTGLW--IKNIVLLTFAFI 437
Query: 380 GFLFGTYTSI 409
GF GTY+++
Sbjct: 438 GFTTGTYSAL 447
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/69 (39%), Positives = 45/69 (65%)
Frame = +2
Query: 203 AAMIPNLSGIISLVGAFSSSALALIFPPLIEIMTFWPDQLGKNDWKFWKDIVIIVFGVTG 382
A +IP+L+ ISLVG+ + ++L L+FPPLIE++ + Q W + ++I ++ F + G
Sbjct: 370 AQLIPHLALFISLVGSVAGTSLTLVFPPLIELLCSYSKQ-ELTKWVWIRNIGLMAFAMVG 428
Query: 383 FLFGTYTSI 409
F GTY S+
Sbjct: 429 FTTGTYASM 437
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = +2
Query: 197 LAAAMIPNLSGIISLVGAFSSSALALIFPPLIEIMTFWPDQLG-----KNDWKFWKDIVI 361
L A +IP L +I LVG S + ALIFPP E++TFW D G + K + ++V+
Sbjct: 373 LMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTYRQRMTKIFINLVV 432
Query: 362 IVFGVTGFLFGTYTSI 409
+ GV + G YT+I
Sbjct: 433 MAIGVFAIIAGVYTNI 448
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +2
Query: 203 AAMIPNLSGIISLVGAFSSSALALIFPPLIEIMTFWPDQLGKND-WKFWKDIVIIVF-GV 376
A ++PNL II LVG S ++LI P ++ M F P + D +KF++ ++I VF V
Sbjct: 400 ALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQKLIINVFLFV 459
Query: 377 TGFLF---GTYTSIEN 415
G+ F G Y+SI++
Sbjct: 460 LGWFFLGAGLYSSIDD 475
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 191 IVLAAAMIPNLSGIISLVGAFSSSALALIFPPLIEIMTFWPDQLGKNDWKF--WKDIVII 364
+ L + IP LS ++ LVG + LAL+FP L ++ F P + + F + D V I
Sbjct: 355 VFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLLIFLPQFECRIGFLFDIFLDFVCI 414
Query: 365 VFGVTGFLFGTYTSIEN 415
+ G+ ++G+ T +++
Sbjct: 415 ILGMFFVIYGSITHVQH 431
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 191 IVLAAAMIPNLSGIISLVGAFSSSALALIFPPLIEIMTFWPDQLGKNDWKF--WKDIVII 364
+ L + IP LS ++ LVG + LAL+FP L ++ F P + + F + D V I
Sbjct: 410 VFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLLIFLPQFECRIGFLFDIFLDFVCI 469
Query: 365 VFGVTGFLFGTYTSIEN 415
+ G+ ++G+ T +++
Sbjct: 470 ILGMFFVIYGSITHVQH 486
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Frame = +2
Query: 206 AMIPNLSGIISLVGAFSSSALALIFPPL----IEIMTFWPDQLGKNDW---KFWK----- 349
A +PN +++LVG + L LIFPPL +E+ D K ++ WK
Sbjct: 305 ASVPNFGVVVNLVGGSTLPLLVLIFPPLFAMCLEVRQKLEDDGAKEEFSLKSIWKYHPKP 364
Query: 350 ----DIVIIVFGVTGFLFGTYTSIEN 415
DI I V G + TY S+ +
Sbjct: 365 RLLLDIFIYVLGTYVMVHSTYHSLSS 390
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 197 LAAAMIPNLSGIISLVGAFSSSALALIFPPLIEI 298
+ A + PN+ I+ L GAF S +A I P I I
Sbjct: 374 ILAILTPNVEFILGLTGAFIGSLVATILPSTIYI 407
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 246 PTNEIIPLKFGIIAAAKTIVLSLRNVALEQILMQSWPYKTNCVFAST 106
P I LK G+ LSL VA+ + L Q +PY + V+ T
Sbjct: 71 PWTRRIQLKIGLACILIADSLSLFTVAIYETLFQGFPYAVDFVYPLT 117
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 246 PTNEIIPLKFGIIAAAKTIVLSLRNVALEQILMQSWPYKTNCVFAST 106
P I LK G+ LSL VA+ + L Q +PY + V+ T
Sbjct: 71 PWTRRIQLKIGLACILIADSLSLFTVAIYETLFQGFPYAVDFVYPLT 117
>U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical
protein F52E4.7 protein.
Length = 848
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 274 HISTTDRDHDVLAGSAREKRLEILERYRHYC 366
HI+ D + +LAGSA EK I E Y+ C
Sbjct: 92 HITIGDHQYVILAGSAEEKDEFIRELYKLSC 122
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 322 REKRLEILERYRHYCFRCNRFPVRYLY*YR-EYINKILNYLNFITILYN 465
+ K++ +E + H C C RY Y + + +N + + L T+ YN
Sbjct: 725 KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNMCDELGKRTVNYN 773
>U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical
protein C26F1.6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 155 ICSKATFRNER-TIVLAAAMIPNLSGIISLVGAFSSSALALIFPPLIEIM 301
I ++ TFR + ++LAA + +L + + F+S+ L + PP I M
Sbjct: 30 IYTRKTFRKKSINVLLAALSMSDLCVCVLAIPVFASTQLQQVIPPTITAM 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,681,880
Number of Sequences: 27780
Number of extensions: 237994
Number of successful extensions: 610
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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