Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h04
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 464  FEFWVMASLTDGKSLRIKYCLISDTSFISDSPALTSKFSNMLLTS 330
            +EFWV A+ T G+    K   +S ++ +   PA  + F +   T+
Sbjct: 1278 YEFWVTAATTIGEGQPSKKVTVSPSASV---PAKIASFDDTFTTT 1319


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = +1

Query: 304 KSYTTRLKE-DVKSMLENFEVRAGESLMKLVSDIKQYLILNDFPSVNEAITQNSKLFRTK 480
           KS   R  E D K  L     R  E +MK  S +  Y      P+    + QNS L +  
Sbjct: 466 KSLRGRKDEADYKDKLHKVAPRIKERMMKEGSMMVTYQAQKGHPNFFRIVFQNSGLDKAD 525

Query: 481 QQECDQKLMSLRDDI 525
                +++  L  D+
Sbjct: 526 MVHLVEEIERLGSDL 540


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 494 SHSCCFVRNNFEFW 453
           SH C FV +N  FW
Sbjct: 113 SHYCLFVASNCFFW 126


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 494 SHSCCFVRNNFEFW 453
           SH C FV +N  FW
Sbjct: 113 SHYCLFVASNCFFW 126


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 355 FEVRAGESLMKLVSDIKQYLILNDFPSVNEAI 450
           FEV     +++L+SD+KQ+   +D P +++ I
Sbjct: 53  FEVNNTPEILQLMSDLKQH--QSDDPVLSQII 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,843
Number of Sequences: 336
Number of extensions: 2938
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)