Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h03
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 598  C*TCHRHLRFRAGSLLSQGYLLWPCVVLVLLASKA*FLGVLRPS 467
            C TC  +++     +LS GY L    V+V  A +    GV  PS
Sbjct: 961  CFTCKSNIQLIVAQILSTGYALIMMAVIVGTALQLREDGVGSPS 1004


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 598  C*TCHRHLRFRAGSLLSQGYLLWPCVVLVLLASKA*FLGVLRPS 467
            C TC  +++     +LS GY L    V+V  A +    GV  PS
Sbjct: 961  CFTCKSNIQLIVAQILSTGYALIMMAVIVGTALQLREDGVGSPS 1004


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 598  C*TCHRHLRFRAGSLLSQGYLLWPCVVLVLLASKA*FLGVLRPS 467
            C TC  +++     +LS GY L    V+V  A +    GV  PS
Sbjct: 961  CFTCKSNIQLIVAQILSTGYALIMMAVIVGTALQLREDGVGSPS 1004


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 598  C*TCHRHLRFRAGSLLSQGYLLWPCVVLVLLASKA*FLGVLRPS 467
            C TC  +++     +LS GY L    V+V  A +    GV  PS
Sbjct: 961  CFTCKSNIQLIVAQILSTGYALIMMAVIVGTALQLREDGVGSPS 1004


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 403  IRQTNEFLEKWRLRRIPTDFSY 468
            I+   +FLEKW    +  D+ Y
Sbjct: 1500 IKHVLQFLEKWNFDGLDLDWEY 1521


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 61  LKFSVRQIKMLVQTLSTLMYTFVF 132
           ++FS ++I +LV +   L   FVF
Sbjct: 276 IRFSFKEIGLLVDSTYCLFLLFVF 299


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 61  LKFSVRQIKMLVQTLSTLMYTFVF 132
           ++FS ++I +LV +   L   FVF
Sbjct: 276 IRFSFKEIGLLVDSTYCLFLLFVF 299


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 61  LKFSVRQIKMLVQTLSTLMYTFVF 132
           ++FS ++I +LV +   L   FVF
Sbjct: 276 IRFSFKEIGLLVDSTYCLFLLFVF 299


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 281 LIGFSLPTNCVFFASSRNVFFTKQAILQNIVWNISTKPL 165
           L+  +LP  CVFF  S  +FF     +  IV+ +  K L
Sbjct: 228 LVEDTLP--CVFFLGSILIFFIFPLAILIIVYILIAKTL 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,332
Number of Sequences: 336
Number of extensions: 3376
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)