Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h02
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.9  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   7.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 161 RNTKSVNRGNGFNRESKEIHQ 223
           R     NRGNGF + S +  Q
Sbjct: 343 RPAAPANRGNGFPKRSSDEQQ 363


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 481 CFILFLN*ELHFYCGSHVF 537
           C++LF   +LH  C S  F
Sbjct: 72  CYMLFREPQLHNLCRSECF 90


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/57 (21%), Positives = 22/57 (38%)
 Frame = +1

Query: 238 DTYWRLNYTWWKPGKE*LFI*YLEYFLDYSGSSTTTSLYQPYHDCGGITGSFHHEWR 408
           D  WR+   W+        I +L+  + YS +    +L    +D      +F   W+
Sbjct: 103 DIAWRITVAWYAGNVLCKIIRFLQAVVTYSSTYVLVALSIDRYDAITHPMNFSGSWK 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,256
Number of Sequences: 336
Number of extensions: 3770
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)