Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2h02
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 29 0.90
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 28 1.2
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 28 1.2
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 28 1.6
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 27 2.8
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 2.8
SPBPB2B2.07c |||S. pombe specific DUF999 protein family 7|Schizo... 27 3.6
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 6.4
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 25 8.4
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.7 bits (61), Expect = 0.90
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 204 KVKKFISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYYITISAI 362
+VK F+S W + + E W IAI+I IL L + I + AI
Sbjct: 97 EVKDFLSIWINESFINENRFYSEIWGPIAIYICLFILLLLGLIYCSKIVVKAI 149
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 204 KVKKFISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYYITISAI 362
+VK F+S W + + E W IAI+I +L L + I + AI
Sbjct: 97 EVKDFLSIWINESFINENRFYSEIWGPIAIYICLFVLLLLGLIYCSKIVVKAI 149
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 204 KVKKFISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYYITISAI 362
+VK F+S W + + E W IAI+I +L L + I + AI
Sbjct: 97 EVKDFLSIWINESFINENRFYSEIWGPIAIYICLFVLLLLGLIYCSKIVVKAI 149
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 228 WYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYY--ITIS 356
W I+ L E + R I F LF LFWF+ ++ +TIS
Sbjct: 268 WDIKTGLTVERFFQHFLARFFCLIFFPFLFFLFWFYMHFNILTIS 312
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 183 EEMDLIEKVKKFISYWY--IRYLLATELYMVET 275
EE+D+IE++ + WY I +LL T +ET
Sbjct: 38 EELDIIEELDDPVDVWYRCIEWLLETRFLGMET 70
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 94 KNFEPFTTQKCHTGQTKKYLNRTKHE 171
K+ PFT+ + HT YLN+T+ +
Sbjct: 2647 KSLSPFTSLRRHTADALLYLNKTQRK 2672
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 325 SGSSTTTSLYQPYHDCGGITGSFHHEWRYHVIEIVTLHHNLVLCTI 462
S +++ + LY+ YH+ I F H R H + V ++ + T+
Sbjct: 2796 SNTNSVSYLYRGYHELAWIINRFAHVARVHHLPEVCINQLTKIYTL 2841
>SPBPB2B2.07c |||S. pombe specific DUF999 protein family
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 165
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 204 KVKKFISYWYIRYLLATELYMVETWERIAIHIVFGI--LFGLFWFF 335
+VK F+S W + + E W IAI+I I L GL F
Sbjct: 117 EVKDFLSIWINESFINENRFYSEIWGPIAIYICLFILLLLGLICMF 162
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 319 DYSGSSTTTSLYQPYHDCGGITGSFHHEWRYHVIEIVTLHHNLVLCTI 462
D S T+ L++ YH+ + F H R H + V L+ + T+
Sbjct: 2856 DSSNPPNTSFLFRGYHETAWLINRFAHVARKHKLPSVCLNQLTKIYTL 2903
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 327 WFFNYYITISAISRLRGNHGIIPS 398
W FN Y+ +SA+S++R IP+
Sbjct: 242 WCFNSYLVVSAMSKVRRPTLTIPT 265
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,902,554
Number of Sequences: 5004
Number of extensions: 59736
Number of successful extensions: 133
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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