Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h02
         (732 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0246 - 14207899-14208052,14208132-14208206,14208682-142088...    34   0.13 
09_06_0312 + 22235287-22235334,22235418-22235535,22235628-222356...    33   0.23 
02_01_0429 - 3132848-3135043                                           30   1.6  
03_06_0575 - 34828347-34828535,34828619-34828723,34829425-348296...    28   6.6  
06_01_0928 - 7159857-7159922,7159923-7160024,7160126-7160206,716...    28   8.8  

>01_03_0246 -
           14207899-14208052,14208132-14208206,14208682-14208801,
           14208905-14208981,14209204-14209285,14209439-14209485,
           14209561-14209681,14210188-14210235,14210478-14210569,
           14211001-14211057,14211203-14211273,14211376-14211493,
           14211574-14211621
          Length = 369

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +3

Query: 213 KFISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYYITISAISRLRGN 380
           +F   WYI      E  M  TW+ IA  + F ++FG   F  +  TI     LR N
Sbjct: 181 QFFCAWYIVDYFVHEELMTSTWDIIAERLGFMLVFGDLVFIPFTFTIQGWWLLRNN 236


>09_06_0312 +
           22235287-22235334,22235418-22235535,22235628-22235698,
           22235799-22235855,22236271-22236362,22236604-22236651,
           22237397-22237517,22237596-22237642,22237796-22237877,
           22238526-22238611,22238864-22238938,22239018-22239171
          Length = 332

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 213 KFISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYYITISA 359
           +F   WYI      E +M  TW+ IA  + F ++FG   F  +  TI +
Sbjct: 181 QFFCAWYIVDYFVHEEFMTSTWDIIAERLGFMLVFGDLVFIPFTFTIQS 229


>02_01_0429 - 3132848-3135043
          Length = 731

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 297 IVFGILFGLFWFFNYYITISAISRLRGNHGII 392
           ++FGI FGLF+ +   +    + RLR   GI+
Sbjct: 692 VIFGITFGLFFAYGVLLDQMVLKRLRSLQGIL 723


>03_06_0575 -
           34828347-34828535,34828619-34828723,34829425-34829615,
           34829747-34829806,34829975-34830104,34830374-34830448,
           34830598-34830608,34830722-34830737
          Length = 258

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 471 EISMFYLIFKLRTTFLLWLSCVLNDKAYI 557
           EI+ F L+ +LR TFL  + CV+ D A++
Sbjct: 11  EIAHFCLMGRLRWTFLGLVLCVIADSAFV 39


>06_01_0928 -
           7159857-7159922,7159923-7160024,7160126-7160206,
           7160289-7160384,7160462-7160566,7160648-7160722,
           7161372-7161431,7161960-7162090,7162175-7162250,
           7163390-7163459,7163603-7163664,7163788-7163871,
           7163973-7164047,7164448-7164585,7164733-7164791,
           7164910-7165123,7167996-7168091,7168701-7169639
          Length = 842

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +3

Query: 375 GNHGIIPS*MEISCHRNCYTSS*SCFMYDITIEISMFYLIFKLRTTFLLWLSCVLND 545
           GN G+      +S H+   T        +IT E S+    F  RT  LLWLS  +ND
Sbjct: 589 GNEGVRALMSALSAHKGKITVL-DIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMND 644


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,501,984
Number of Sequences: 37544
Number of extensions: 308950
Number of successful extensions: 528
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)