Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h02
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77652-7|CAB01119.1|  341|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z68748-7|CAJ85749.1|   80|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z77652-6|CAB01122.1|  357|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine rece...    29   2.6  
AF038608-4|AAU05594.2|  310|Caenorhabditis elegans Serpentine re...    25   3.2  
U40414-4|AAA81407.3|  529|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical ...    29   3.4  

>Z77652-7|CAB01119.1|  341|Caenorhabditis elegans Hypothetical
           protein C06B3.10 protein.
          Length = 341

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +3

Query: 216 FISYWYIRYLLATELYMVETWER--IAIHIVFGILFGLFWFFNYYITISA 359
           F  ++  RYL     Y ++ ++R  I   + F ++FGL WF+  + T++A
Sbjct: 103 FAVHFVYRYLTVIGSYYIKNYDRQIIITLMTFPVIFGLVWFWMTHFTLTA 152


>Z68748-7|CAJ85749.1|   80|Caenorhabditis elegans Hypothetical
           protein F13H10.8 protein.
          Length = 80

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +3

Query: 216 FISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFN 338
           F  + Y++YLL + +YM+E WE+   + V  I+F L  F +
Sbjct: 35  FAEHVYLQYLLVSGIYMLEPWEQRLFNWV--IIFVLTTFIS 73


>Z77652-6|CAB01122.1|  357|Caenorhabditis elegans Hypothetical
           protein C06B3.9 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
 Frame = +3

Query: 216 FISYWYIRYLLATELYMVETWER--IAIHIVFGILFGLFWFF--NYYIT 350
           F  ++  RY++ +E   ++ ++   I+  ++  +LFG+FWF+  +Y++T
Sbjct: 104 FAIHFIYRYMVVSENKYLKKYDAHVISFLLILPLLFGVFWFWVVDYFLT 152


>U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein3 protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +3

Query: 207 VKKFISYWYIRYLLATELYMVETWERIAIHIVFGILFGLFWFFNYYITI 353
           ++  ++ +Y+   + T  ++V T ++    +VFG  F  FW+F  +  I
Sbjct: 56  IQMALATFYLAPTIITSSFLVSTEKKSKWTLVFGSAFLFFWYFETFTQI 104


>AF038608-4|AAU05594.2|  310|Caenorhabditis elegans Serpentine
           receptor, class z protein37 protein.
          Length = 310

 Score = 24.6 bits (51), Expect(2) = 3.2
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
 Frame = +3

Query: 450 FMYDITIEISMFY------LIFKLRTTFLLWLSCVL 539
           F+ ++T++I  +Y      L+  L T FL W S VL
Sbjct: 160 FLANVTVDIQKWYTHEIVYLVVFLLTNFLAWTSAVL 195



 Score = 23.0 bits (47), Expect(2) = 3.2
 Identities = 9/49 (18%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +3

Query: 198 IEKVKKFISYWYI---RYLLATELYMVE-TWERIAIHIVFGILFGLFWF 332
           ++  ++FI Y+      ++  ++ Y++  +W    + ++  ++ G+FWF
Sbjct: 112 LQTFERFIMYFTKSAENFVKISQQYLIRRSWILYIVFVMKDLILGIFWF 160


>U40414-4|AAA81407.3|  529|Caenorhabditis elegans Hypothetical
           protein F53B3.3 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 117 SKVPYWSNQKISKQNETRKA*IEEMDLIEKVK 212
           SK+ Y  N+  +  N  RKA + E D IE +K
Sbjct: 91  SKISYLLNRNSTNANRKRKAAVAEADCIESIK 122


>AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.21 protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 308 NTFWIILVLQLLHHYISHITTAGESRDHSIMNGDIM 415
           N F I+ V + LH  +SH+T++G  R H    G ++
Sbjct: 410 NDFGIVTVEESLHQLVSHMTSSGLYRFHDTPLGALV 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,620,935
Number of Sequences: 27780
Number of extensions: 321378
Number of successful extensions: 733
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)