Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h01
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.9  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.7  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 344 NIQFPAHQTISDLPNINWNEYGIDVTDTIGASES 445
           N   P+   + D+ N+NWN    +    +  SE+
Sbjct: 440 NWNMPSTSVVGDMLNMNWNPSAQNDLSGVNLSET 473


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +2

Query: 434 ASESKQCKEELDSSFKVRGRKFTDNKPETFNQL 532
           +++  +C E++ ++ +       DNKP+ + QL
Sbjct: 67  STDCAKCNEKVKANVRKVLHHLIDNKPDMWKQL 99


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 418 NIYSILIPVYIGQIRDSLMSRKLN-VSGSEIINK 320
           N    L+P+++ Q++D     +LN +S  + +N+
Sbjct: 362 NTIEHLLPLFLTQLKDECPEVRLNIISNLDCVNE 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,845
Number of Sequences: 336
Number of extensions: 2290
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)