Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2h01
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0388 - 3003096-3003149,3003168-3003197,3003245-3003304,300... 41 9e-04
06_03_1070 - 27351781-27351882,27352461-27352520,27353033-273531... 36 0.042
02_05_0313 - 27795152-27795268,27795476-27795515,27795773-277958... 36 0.042
05_01_0456 - 3619537-3619581,3619687-3619808,3619940-3620059,362... 35 0.056
04_04_0929 - 29474540-29475247,29475485-29475850,29476032-294760... 34 0.098
02_05_0337 - 28060009-28060716,28061055-28061498,28061732-280617... 33 0.17
06_03_1491 - 30510016-30510021,30510418-30511026,30511119-305114... 33 0.23
01_06_1435 + 37351653-37351990,37352241-37352424 31 0.69
03_06_0597 - 34975608-34975836,34976323-34976732 31 0.91
01_01_0278 - 2281536-2281977,2282523-2282926 30 2.1
01_07_0201 + 41956938-41957022,41957123-41957214,41957460-419575... 29 2.8
12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379 29 3.7
08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150 28 6.4
06_01_0512 - 3695109-3695523,3696318-3696868 28 6.4
06_01_0040 - 393818-393938,394331-394389,394595-394756,394875-39... 28 6.4
05_05_0054 - 21936875-21937346,21937452-21937927 28 6.4
04_04_0171 - 23282840-23283036,23283360-23283660,23283747-232840... 28 6.4
01_06_1376 - 36757458-36757923,36758040-36758473 28 6.4
>01_01_0388 -
3003096-3003149,3003168-3003197,3003245-3003304,
3003431-3003552,3003669-3003794,3003890-3003980,
3004261-3004386,3004501-3004656
Length = 254
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = +2
Query: 491 RKFTDNKPETFNQLWSCEEQKRXXXXXXXXXXXXXXARRYKKIAQALGTRTPIQVMSRIQ 670
+ +T KP + WS EE +R R +KKI + +GT+T IQ+ S Q
Sbjct: 8 KPYTITKPR---ERWSEEEHERFLDALIMY------GRDWKKIEEHVGTKTTIQIRSHAQ 58
Query: 671 KYFAKLAKAGL 703
KYF K+ K GL
Sbjct: 59 KYFLKVQKMGL 69
>06_03_1070 -
27351781-27351882,27352461-27352520,27353033-27353142,
27353583-27353693,27353781-27353939,27354035-27354158,
27354755-27354812,27356656-27356933
Length = 333
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 602 RRYKKIAQALGTRTPIQVMSRIQKYFAKLAKAG 700
R +KKI +G++T IQ+ S QKYF K+ K G
Sbjct: 96 RDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNG 128
>02_05_0313 -
27795152-27795268,27795476-27795515,27795773-27795873,
27796862-27796921,27797185-27797294,27797911-27798033,
27798148-27798271,27798585-27798642,27798713-27798841,
27799602-27799762
Length = 340
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 602 RRYKKIAQALGTRTPIQVMSRIQKYFAKLAKAG 700
R +KKI +G++T IQ+ S QKYF K+ K G
Sbjct: 100 RDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNG 132
>05_01_0456 -
3619537-3619581,3619687-3619808,3619940-3620059,
3620143-3620413,3620555-3620612,3620698-3620822
Length = 246
Score = 35.1 bits (77), Expect = 0.056
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 488 GRKFTDNKPETFN---QLWSCEEQKRXXXXXXXXXXXXXXARRYKKIAQALGTRTPIQVM 658
G K KP T + WS EE +R R +K+I + T+T IQ+
Sbjct: 10 GTKKKARKPYTITRPRERWSAEEHERFLDALILF------GRDWKRIEAFVATKTAIQIR 63
Query: 659 SRIQKYFAKLAKAGL 703
S QK+F K K GL
Sbjct: 64 SHAQKHFLKARKFGL 78
>04_04_0929 -
29474540-29475247,29475485-29475850,29476032-29476093,
29476191-29476302,29476401-29476529,29476724-29476738
Length = 463
Score = 34.3 bits (75), Expect = 0.098
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 602 RRYKKIAQALGTRTPIQVMSRIQKYFAKLAK 694
R +++I + +GT+T +Q+ S QK+F+K+ K
Sbjct: 79 RAWRRIQEHIGTKTAVQIRSHAQKFFSKVIK 109
>02_05_0337 -
28060009-28060716,28061055-28061498,28061732-28061793,
28061896-28062007,28062144-28062263
Length = 481
Score = 33.5 bits (73), Expect = 0.17
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +2
Query: 602 RRYKKIAQALGTRTPIQVMSRIQKYFAKLAK 694
R +++I + +GT+T +Q+ S QK+F+K+ +
Sbjct: 71 RAWRRIQEHIGTKTAVQIRSHAQKFFSKVVR 101
>06_03_1491 -
30510016-30510021,30510418-30511026,30511119-30511484,
30511660-30511721,30511826-30511937,30512074-30512211,
30512788-30512811
Length = 438
Score = 33.1 bits (72), Expect = 0.23
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +2
Query: 602 RRYKKIAQALGTRTPIQVMSRIQKYFAKLAK 694
R +++I + +GT+T +Q+ S QK+F+K+ +
Sbjct: 85 RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 115
>01_06_1435 + 37351653-37351990,37352241-37352424
Length = 173
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 635 TRTPIQVMSRIQKYFAKLAKAG 700
TRTP QV S QKYF + A AG
Sbjct: 137 TRTPTQVASHAQKYFIRQANAG 158
>03_06_0597 - 34975608-34975836,34976323-34976732
Length = 212
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 635 TRTPIQVMSRIQKYFAKLAK 694
+RTPIQ+ S QKYF ++AK
Sbjct: 161 SRTPIQIASHTQKYFLRMAK 180
>01_01_0278 - 2281536-2281977,2282523-2282926
Length = 281
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 635 TRTPIQVMSRIQKYFAKLAKAG 700
TRTP QV S QKYF +L G
Sbjct: 159 TRTPTQVASHAQKYFIRLNSGG 180
>01_07_0201 +
41956938-41957022,41957123-41957214,41957460-41957561,
41957691-41957763,41958297-41958403,41958476-41958599,
41959004-41959198,41959515-41959600,41959695-41959802,
41960171-41960266,41960347-41960445,41960562-41960636,
41961040-41961171,41961252-41961367,41961935-41962109
Length = 554
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 380 LPNINWNEYGIDVTDTIGAS 439
LP+ +WNE+G D+TD + A+
Sbjct: 526 LPSTSWNEFGSDITDHVLAT 545
>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
Length = 881
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +2
Query: 215 LLKYIVKLEAQKTQALKDIETLAESQNKALDDPLTFIDDLRSGNIQFPAHQTISDLPNIN 394
L + +V + Q + D+++L + L PL ++DLR L +
Sbjct: 595 LARLLVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRR-------------LTKLR 641
Query: 395 WNEYGIDVTDTIGASESKQCKEELDSSFKVRGR 493
E + +DT+GA E + +E L+SS V G+
Sbjct: 642 TLEIVLHGSDTLGAHEMGRYEEALESSLTVLGK 674
>08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150
Length = 383
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 488 GRKFTDNKPETFNQLWSCEEQKRXXXXXXXXXXXXXX--ARRYKKIAQALGTRTPIQVMS 661
G D+K + WS EE K+ +R Y +G+RTP QV S
Sbjct: 90 GSDGNDDKRRKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNY------VGSRTPTQVAS 143
Query: 662 RIQKYFAK 685
QKYF +
Sbjct: 144 HAQKYFIR 151
>06_01_0512 - 3695109-3695523,3696318-3696868
Length = 321
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 608 YKKIAQAL-GTRTPIQVMSRIQKYFAKLAKAGLPIP 712
+K I++ L TRT QV S QK+F K+ G +P
Sbjct: 198 WKNISKHLVTTRTAAQVSSHAQKFFLKMEARGEAVP 233
>06_01_0040 -
393818-393938,394331-394389,394595-394756,394875-395085,
395174-395290,395794-395859,396020-396292,397410-397492,
398322-398327,398738-398797,399093-399137,399530-399639,
400412-400510,400599-400796,401463-401517,401571-401628,
402191-402360
Length = 630
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 602 RRYKKIAQALGTRTPIQVMSRIQKYFAKLAKAGLP 706
R +KKI +G++T IQ+++ + +YF L LP
Sbjct: 60 RDWKKIEAYVGSKTVIQLVAFVTEYFRVLQFLNLP 94
>05_05_0054 - 21936875-21937346,21937452-21937927
Length = 315
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 635 TRTPIQVMSRIQKYFAKLAKAG 700
+RTP QV S QKYF +L G
Sbjct: 183 SRTPTQVASHAQKYFIRLNSGG 204
>04_04_0171 -
23282840-23283036,23283360-23283660,23283747-23284070,
23284678-23284698,23284877-23285788
Length = 584
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 458 EELDSSFKVRGRKFTDNKPETFNQL 532
+ELD+ RGR F D + +T NQL
Sbjct: 396 DELDAVGGSRGRSFNDERDQTLNQL 420
>01_06_1376 - 36757458-36757923,36758040-36758473
Length = 299
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 635 TRTPIQVMSRIQKYFAKLAKAG 700
+RTP QV S QKYF +L G
Sbjct: 169 SRTPTQVASHAQKYFIRLNSGG 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,386,484
Number of Sequences: 37544
Number of extensions: 222217
Number of successful extensions: 471
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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