Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g24
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103831-1|AAI03832.1|  887|Homo sapiens Bardet-Biedl syndrome 9...    58   3e-08
BC032715-1|AAH32715.1|  310|Homo sapiens BBS9 protein protein.         47   8e-05
AF095771-1|AAD25981.1|  802|Homo sapiens PTH-responsive osteosar...    47   8e-05
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr...    31   5.5  

>BC103831-1|AAI03832.1|  887|Homo sapiens Bardet-Biedl syndrome 9
           protein.
          Length = 887

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
 Frame = +1

Query: 289 MSIFKVKYWWSTDSLHTKETVSGSQNAYSL-KVDRFNSHSDSDCILLAE-ESTIKVFKPN 462
           MS+FK + WWST  L  KE     Q    L  VD  NS +  D I++      +++F P+
Sbjct: 1   MSLFKARDWWST-ILGDKEEFD--QGCLCLANVD--NSGNGQDKIIVGSFMGYLRIFSPH 55

Query: 463 IEQ-----ENSHTLLESELEDVILQIETGKFVSEIADRQIIVLHARSYSIYQLLKQEGHT 627
             +     +    LLE +L D +LQ+E GKFVS      + VLH+R   +Y +    G+ 
Sbjct: 56  PAKTGDGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNV 115

Query: 628 NAGEQNKLEPLVRHAFTR 681
             G Q +++ +  H   R
Sbjct: 116 EHGNQCQMKLMYEHNLQR 133


>BC032715-1|AAH32715.1|  310|Homo sapiens BBS9 protein protein.
          Length = 310

 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = +1

Query: 487 LLESELEDVILQIETGKFVSEIADRQIIVLHARSYSIYQLLKQEGHTNAGEQNKLEPLVR 666
           LLE +L D +LQ+E GKFVS      + VLH+R   +Y +    G+   G Q +++ +  
Sbjct: 24  LLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQCQMKLMYE 83

Query: 667 HAFTR 681
           H   R
Sbjct: 84  HNLQR 88


>AF095771-1|AAD25981.1|  802|Homo sapiens PTH-responsive
           osteosarcoma B1 protein protein.
          Length = 802

 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = +1

Query: 487 LLESELEDVILQIETGKFVSEIADRQIIVLHARSYSIYQLLKQEGHTNAGEQNKLEPLVR 666
           LLE +L D +LQ+E GKFVS      + VLH+R   +Y +    G+   G Q +++ +  
Sbjct: 24  LLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQCQMKLMYE 83

Query: 667 HAFTR 681
           H   R
Sbjct: 84  HNLQR 88


>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
            protein.
          Length = 2320

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +1

Query: 340  KETVSGSQNAYSLKVDRFNSHSDSDCILLAEESTIKVFKPNIEQENSHTLLESELEDV 513
            KET+SG +N +  K  R   H ++     A++  + V+K +    NS +  E ELED+
Sbjct: 2249 KETISGPENVWIRKSSRKLPHRNASA--AAKKKLLNVYKEDDTTINSES--EKELEDI 2302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,946,913
Number of Sequences: 237096
Number of extensions: 1821054
Number of successful extensions: 2780
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2775
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)