Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g21
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83744-2|CAB06039.1|  430|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z79603-7|CAB01896.1|  259|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z74041-2|CAA98521.1|  237|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical ...    28   5.3  
L16685-8|AAO12393.1|  285|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z83744-2|CAB06039.1|  430|Caenorhabditis elegans Hypothetical
           protein C06A12.5 protein.
          Length = 430

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 122 CLLVYILPLIVSPFLSC 172
           CL ++++P +V PFLSC
Sbjct: 10  CLYLFVIPFVVQPFLSC 26


>Z79603-7|CAB01896.1|  259|Caenorhabditis elegans Hypothetical
           protein M163.7 protein.
          Length = 259

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 594 HAARENTTHSVQNPFALQNIRSEFS 520
           H  + N   S QNPF+ QN+ S FS
Sbjct: 225 HLFQSNGQTSAQNPFSFQNLESIFS 249


>Z74041-2|CAA98521.1|  237|Caenorhabditis elegans Hypothetical
           protein T03F7.6 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 171 VFPVVIAA*TTLYRKRAKKVRS-RENKQEIHKYEHFDIA*NN*YNITQILNEY 326
           VFP++  A +T  RK+  K+   ++ ++++  +  F     N  NI+Q  NEY
Sbjct: 176 VFPILFLAGSTKIRKKIAKINPFQQFEEKVELHFEFRQLNGNRINISQSQNEY 228


>Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK1058.3 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -1

Query: 627 YNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSN---VFFKYFSNKFTSF 475
           + GAK +++   +   NT  S+ NP A    RS   +N   V    F N F SF
Sbjct: 29  WQGAKTEKSTTISTSSNTEQSILNPLAPGGTRSSGIANENYVSTYVFDNDFPSF 82


>AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical
           protein R06B10.2 protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 1   DFQNIQISQGHESQ*NQIKSI**CSFEKSII*KKTFKLSNVS 126
           D +N+    G E + N+IK+     F+KS+   K+FKLSN S
Sbjct: 589 DVKNLNSLDGLEDELNRIKTAI-SDFKKSVKPVKSFKLSNYS 629


>L16685-8|AAO12393.1|  285|Caenorhabditis elegans Hypothetical
           protein ZC21.6a protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 514 CFF*IFLEQIYVFQCSFYCSLDLMTEDFIE 425
           CFF +F  ++++  CS  C+  LMT  F E
Sbjct: 247 CFF-VFHTKVFIDMCSSVCNFSLMTTCFGE 275


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +1

Query: 574 CIFPCCMV-TCPFLLSPIIACFPILCPCFIACC 669
           C+ P  M  TCP + +PI    P   PC +  C
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPTPAPCPVKTC 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,860,008
Number of Sequences: 27780
Number of extensions: 283530
Number of successful extensions: 888
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)