Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g14
         (205 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   0.63 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   0.63 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   0.63 
AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.    21   1.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   5.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    19   7.8  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              19   7.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   7.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 0.63
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 204 FFFLYTMLPFC 172
           FF +Y ++PFC
Sbjct: 343 FFLMYVIVPFC 353


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 0.63
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 204 FFFLYTMLPFC 172
           FF +Y ++PFC
Sbjct: 343 FFLMYVIVPFC 353


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 0.63
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 204 FFFLYTMLPFC 172
           FF +Y ++PFC
Sbjct: 343 FFLMYVIVPFC 353


>AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS
          protein.
          Length = 80

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -1

Query: 88 GCGGPYG-KDMITSSNKT 38
          GC  PYG K+++T S  T
Sbjct: 22 GCAAPYGYKNIMTLSQDT 39


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 69  PYGPPQPVSP 98
           PYG  +P+SP
Sbjct: 324 PYGYVKPISP 333


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 165 LYNKMEASYR 194
           LYN M A YR
Sbjct: 315 LYNVMSAKYR 324


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -1

Query: 91  TGCGGPYGKDMITSSNKTLKC 29
           T C      D+   S K LKC
Sbjct: 102 TECSAISDADLAVKSAKLLKC 122


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 175 KWKHRIEKKK 204
           KW+  IEK+K
Sbjct: 867 KWRGAIEKRK 876


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,521
Number of Sequences: 438
Number of extensions: 901
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)