Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g08
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   5.8  
AF125958-1|AAD14729.1|  342|Caenorhabditis elegans Serpentine re...    28   7.6  

>AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical
           protein H22D07.1 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -3

Query: 331 LYSKKRIVGLVFFEGFQVHSIPGGNVLCVVCL*YFVWSGIMAGTVVSCLKVVDVF-TCSF 155
           LY  K+I+ L+ ++ +      GG  LC  C  +  +S  +   V++C+ +  VF   + 
Sbjct: 87  LYVPKQIIWLITYQWY------GGEFLCRACAFFSTFSFYLNSFVIACIAIDRVFGAYNI 140

Query: 154 TFLLAHAK 131
           + L AH K
Sbjct: 141 SSLNAHRK 148


>Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical
           protein AH10.3 protein.
          Length = 282

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -3

Query: 328 YSKKRIVGLVFFEGF-QVHSIPGGNVLCVVCL 236
           +SKK ++ L+FFE F ++ + P G +LC  C+
Sbjct: 122 WSKKCLLELIFFENFARLSNFPIGYILCQHCV 153


>Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical
           protein F53H2.3 protein.
          Length = 667

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 261 PPGIECTWKPSKKTRPTMRFFEYNQTESSFYELGIIQSGK 380
           P G      P ++ +PTMR+++ N ++  FYE+  +   K
Sbjct: 368 PQGAHAPPPPQQQQQPTMRYYDAN-SDGFFYEMASVDGWK 406


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
            protein 2 protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -3

Query: 223  WSGIMAGTVVSCLKVVDVFTCSFTFLLAHAKKCCTKKVRLVTNIIKNTASNNERQ 59
            WS       + CL++++   C F  LL+  K    +K++ V +     A  NE +
Sbjct: 862  WSEWDTNRKLECLRLLNEIVCEFDKLLSKPKFSSVEKIKTVGSTYMAAAGLNESE 916


>AF125958-1|AAD14729.1|  342|Caenorhabditis elegans Serpentine
           receptor, class j protein9 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +3

Query: 483 HVLALVKFKPPKDIIFGCILTII-SEFWTITAASCIDAIEELDSLDSFVMLEDYGLEKK 656
           H   L  F  P  II   I  ++ +  W++    C+   EE+  + S   LE++G   K
Sbjct: 120 HADKLPIFFQPLGIIISIIFLLMHAASWSVICQQCLAGNEEVREIISIDFLENFGANSK 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,123,775
Number of Sequences: 27780
Number of extensions: 379018
Number of successful extensions: 1096
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)