Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g07
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    31   0.009
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    31   0.009
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.76 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.1  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 436 NLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 597
           NL K       K     +   +  PGE+L ++G +G GK+T L  L      NL
Sbjct: 79  NLIKRKDSPVQKKHILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNL 132


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 436 NLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 597
           NL K       K     +   +  PGE+L ++G +G GK+T L  L      NL
Sbjct: 79  NLIKRKDSPVQKKHILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNL 132


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 89  RTHLFLIYKFFTSFIGLNFYV 27
           R HLF+ Y F TS++  +++V
Sbjct: 133 RIHLFVRYVFVTSYLLFDYFV 153



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 128 LNSCIICLLNFQFRTHLFLI--YKFFTSFIGLNFY 30
           + S I CL+NF  R   F +   K F +F+    Y
Sbjct: 18  VQSEIFCLVNFNHRESYFRLSKAKSFCTFVAALVY 52


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/22 (27%), Positives = 11/22 (50%)
 Frame = +3

Query: 177 RNVSTKRSRGNRQANSYRYCEC 242
           RN+   R +G  +   + +C C
Sbjct: 559 RNLDLNRPQGGEELAQFNFCGC 580


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,063
Number of Sequences: 336
Number of extensions: 3883
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)