Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2g07
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 244 3e-65
Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical pr... 38 0.009
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 36 0.027
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 36 0.035
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 36 0.035
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 33 0.14
U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical pr... 33 0.14
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 33 0.14
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 33 0.14
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 33 0.19
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 33 0.19
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 33 0.25
U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.25
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 33 0.25
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 33 0.25
AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH oxidored... 33 0.25
Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical p... 32 0.33
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 32 0.33
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 32 0.33
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 31 0.58
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 31 0.76
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 31 0.76
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 31 0.76
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 31 1.0
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 31 1.0
AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transpor... 31 1.0
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 31 1.0
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 31 1.0
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 31 1.0
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 30 1.3
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 30 1.3
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 30 1.3
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 30 1.8
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 30 1.8
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 7.1
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68751-9|CAA92979.2| 238|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68337-11|CAA92754.2| 238|Caenorhabditis elegans Hypothetical p... 27 9.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 27 9.4
AL032646-1|CAA21676.1| 385|Caenorhabditis elegans Hypothetical ... 27 9.4
AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm rece... 27 9.4
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 244 bits (598), Expect = 3e-65
Identities = 113/161 (70%), Positives = 125/161 (77%)
Frame = +1
Query: 199 HEETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGC 378
+ ETD RIAIV DRCKPK C CK++CPV R GK CI V I+ ISE LCIGC
Sbjct: 10 NNETDVPLRIAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQISEILCIGC 69
Query: 379 GICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKST 558
GICVKKCP+DAI IIN+P+NL TTHRYS+NSFKLHRLP PR GEVLGLVG NGIGKST
Sbjct: 70 GICVKKCPYDAIKIINLPANLANETTHRYSQNSFKLHRLPTPRCGEVLGLVGTNGIGKST 129
Query: 559 ALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKI 681
ALKILAGKQKPNLG + +W I+ HFRGSELQNYFT+I
Sbjct: 130 ALKILAGKQKPNLGNFQKEQEWTTIINHFRGSELQNYFTRI 170
Score = 34.3 bits (75), Expect = 0.082
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1
Query: 514 EVLGLVGQNGIGKSTALKILAGKQKP 591
E++ ++G+NG GK+T +K++AG KP
Sbjct: 382 EIIVMLGENGTGKTTMIKMMAGSLKP 407
>Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical
protein F18E2.2 protein.
Length = 622
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 520 LGLVGQNGIGKSTALKILAGKQKPNLG 600
+ +VG NG+GKST LK+L GK PN G
Sbjct: 433 IAIVGPNGVGKSTLLKLLIGKIDPNDG 459
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQ 585
G GLVG NG+GK+T LK + ++
Sbjct: 105 GRRYGLVGPNGMGKTTLLKHIGARK 129
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
G++ GL+G NG GK+T + IL G P+ G
Sbjct: 360 GQITGLLGHNGAGKTTTMSILCGLYAPSSG 389
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
PGE GL+G NG GK+T +L K +P G
Sbjct: 1232 PGECFGLLGLNGAGKTTTFAMLTAKIRPGHG 1262
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 35.5 bits (78), Expect = 0.035
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 499 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 597
+ RPGE+ ++G +G GK+T L IL G+ N+
Sbjct: 125 VARPGELTFIMGSSGAGKTTLLNILTGRNLKNI 157
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 35.5 bits (78), Expect = 0.035
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 499 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 597
+ RPGEV ++G +G GK+T L +L + NL
Sbjct: 88 VARPGEVTAIIGPSGAGKTTLLNVLTKRNLSNL 120
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQ 585
G GLVG+NGIGK+T LK+++ +Q
Sbjct: 204 GRRYGLVGRNGIGKTTLLKMISSQQ 228
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 526 LVGQNGIGKSTALKILAGKQKPNLG 600
+VG+NG GK+T LK+L +P++G
Sbjct: 528 IVGENGAGKTTLLKLLLDDLQPSVG 552
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 499 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI 633
+ PG + LVG +G GKST++ +L +P G T D D +E+
Sbjct: 453 VVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAGNVTIDGTDVREL 498
>U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical
protein ZC487.2 protein.
Length = 317
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 128 LNSCIICLLNFQFRTHLFLIYKFFTSFIGLNFYVFELI 15
L CI C NF+F L L F SFIG+NFY +++
Sbjct: 155 LQKCIACAENFKFSQTLDLC-AFGVSFIGVNFYAGQVL 191
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 499 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI 633
+ PG + LVG +G GKST++ +L +P G T D D +E+
Sbjct: 453 VVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAGNVTIDGTDVREL 498
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
PGE + LVG +G GKS+ + +L PN G+
Sbjct: 525 PGETVALVGPSGSGKSSCISLLENFYVPNAGQ 556
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
+PG+ + LVG +G GKST +++L P+ G+
Sbjct: 409 QPGQTVALVGSSGCGKSTIIQLLQRFYNPDAGQ 441
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT 609
+PG+ L LVG +G GKST + +L P G T
Sbjct: 1056 KPGQTLALVGPSGCGKSTVISLLERLYDPLEGAVT 1090
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
+PG+ + LVG +G GKST +++L P+ G+
Sbjct: 409 QPGQTVALVGSSGCGKSTIIQLLQRFYNPDAGQ 441
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT 609
+PG+ L LVG +G GKST + +L P G T
Sbjct: 1056 KPGQTLALVGPSGCGKSTVISLLERLYDPLEGAVT 1090
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
PG+ L+G NG GKST +L G P+ G
Sbjct: 624 PGQCTVLLGHNGAGKSTTFSMLTGVASPSSG 654
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/102 (20%), Positives = 46/102 (45%)
Frame = +1
Query: 376 CGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKS 555
CG V+ P + ++ +++ +SK+S L+ P+ E + G G+ K
Sbjct: 107 CGTLVQVGPVIPVELLKTKLQVQRENIGHFSKHSRNLYAGPLECARETVRAEGVRGLFKG 166
Query: 556 TALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKI 681
++ + N+G P ++ + +FR L+N +T++
Sbjct: 167 GSVVFC----RDNIGYLFYIPVYEGLSRYFRSHNLENTWTQL 204
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
GEV+ L G +G G L I+AG+ KP G
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYG 449
>U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical
protein T20H4.5 protein.
Length = 212
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +1
Query: 277 CKKSCPVVRMGKLCIEVTPNDKIATISEEL----CIGCGICVKKCPFDAITI-INIPSNL 441
C+ CP + + E P+ T ++ CI CG+C + CP DAI N +
Sbjct: 119 CEAICPAQAI-TIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEYST 177
Query: 442 EKHTTHRYSKNSFKLH 489
E H Y+K L+
Sbjct: 178 ETHEELLYNKEKLLLN 193
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 358 EELCIGCGICVKKCPFDAITI 420
EE CI C +C CP AITI
Sbjct: 110 EERCIACKLCEAICPAQAITI 130
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
GEV+ L G +G G L I+AG+ KP G
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYG 449
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
GEV+ L G +G G L I+AG+ KP G
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYG 449
>AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH
oxidoreductase complex I 23.8kDa subunit protein.
Length = 212
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +1
Query: 277 CKKSCPVVRMGKLCIEVTPNDKIATISEEL----CIGCGICVKKCPFDAITI-INIPSNL 441
C+ CP + + E P+ T ++ CI CG+C + CP DAI N +
Sbjct: 119 CEAICPAQAI-TIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEYST 177
Query: 442 EKHTTHRYSKNSFKLH 489
E H Y+K L+
Sbjct: 178 ETHEELLYNKEKLLLN 193
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 358 EELCIGCGICVKKCPFDAITI 420
EE CI C +C CP AITI
Sbjct: 110 EERCIACKLCEAICPAQAITI 130
>Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical
protein C16C10.12 protein.
Length = 610
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +1
Query: 406 DAITIINIP-SNLEKHTTHR-YSKNSFKL-HRLP-IPRPGEVLGLVGQNGIGKSTALKIL 573
+ +T I + N+E T + +SK +L +R+ I +PGE++ L+G +G GK+T + +L
Sbjct: 28 EVVTPITVTWENIEVKTRKKLFSKKQKQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVL 87
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAH 642
+ G+ + LVG +G GKST + +L P GR D D +E+ H
Sbjct: 425 KAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGRVLIDGVDLREVNVH 471
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAH 642
+ G+ + LVG +G GKST + +L P GR D D +E+ H
Sbjct: 425 KAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGRVLIDGVDLREVNVH 471
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT 609
G+ L+G NG GKST +AG +P GR T
Sbjct: 573 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 605
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT 609
G+ L+G NG GKST +AG +P GR T
Sbjct: 560 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT 609
G+ L+G NG GKST +AG +P GR T
Sbjct: 560 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT 609
G+ L+G NG GKST +AG +P GR T
Sbjct: 573 GQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 605
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 499 IPRPGEVLGLVGQNGIGKSTALKILAGK 582
I +PG++L L+G +G GK+T L +L +
Sbjct: 57 IAKPGQLLALMGASGAGKTTLLNMLLSR 84
>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical
protein F55G11.9 protein.
Length = 1431
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 406 DAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQ 585
+A+ I + ++ +T + N L + G+V L+G NG GKST ++ G
Sbjct: 442 NAVADIELSGLVKVYTNGEKAVNGLSLRAIR----GQVSILLGHNGCGKSTTFGMITGMH 497
Query: 586 KPNLGR 603
K GR
Sbjct: 498 KATEGR 503
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
protein F42E11.1 protein.
Length = 1266
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PGE + LVG +G GKST++ +L
Sbjct: 401 PGETIALVGHSGCGKSTSIGLL 422
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKIL 573
GE + LVG +G GKST+++++
Sbjct: 1055 GETVALVGPSGCGKSTSIQLI 1075
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 469 KNSFKLHRLPIP-RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
KN+ L+++ + PG+ + LVG +G GKST + ++ P GR
Sbjct: 562 KNANVLNKINLSIDPGKTIALVGPSGNGKSTLVSLIQQFYTPQSGR 607
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI 633
L IP G+V+ L G +G GKST +L +P GR T D D +E+
Sbjct: 448 LSIPA-GQVVALCGPSGEGKSTITHLLERFYEPKSGRVTLDGRDLREL 494
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
+PG + LVG +G GKST++ +L +P G+
Sbjct: 443 KPGTSVALVGHSGCGKSTSVGLLTRLYEPEGGK 475
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PGE + LVG +G GKST++ +L
Sbjct: 403 PGETVALVGHSGCGKSTSIGLL 424
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PGE + LVG +G GKST++ +L
Sbjct: 403 PGETVALVGHSGCGKSTSIGLL 424
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PGE + LVG +G GKST++ +L
Sbjct: 403 PGETVALVGHSGCGKSTSIGLL 424
>AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform b protein.
Length = 674
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
PGEV+ LVG +G GKS+ + +L +P G
Sbjct: 549 PGEVVALVGPSGGGKSSCIAMLEHFYEPTSG 579
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
PGEV+ LVG +G GKS+ + +L +P G
Sbjct: 549 PGEVVALVGPSGGGKSSCIAMLEHFYEPTSG 579
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 487 HRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
HR PI R LG G GK+T LK+L G+ +L R
Sbjct: 16 HRTPIIRREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLR 54
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 487 HRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
HR PI R LG G GK+T LK+L G+ +L R
Sbjct: 16 HRTPIIRREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLR 54
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 430 PSNLEKHTTHRYSKNSFKLHR---LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
P + +H + RY++N+ +++ I + LVG NG GKST LK+L P G
Sbjct: 392 PVIMVQHVSFRYNENTPWIYKDIDFGIDLDTRI-ALVGPNGAGKSTLLKLLCTDVMPTDG 450
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKP 591
G GL+G NG GKST ++ + K+ P
Sbjct: 107 GRRYGLIGLNGSGKSTIIQAIYNKEMP 133
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 430 PSNLEKHTTHRYSKNSFKLHR---LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
P + +H + RY++N+ +++ I + LVG NG GKST LK+L P G
Sbjct: 391 PVIMVQHVSFRYNENTPWIYKDIDFGIDLDTRI-ALVGPNGAGKSTLLKLLCTDVMPTDG 449
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKP 591
G GL+G NG GKST ++ + K+ P
Sbjct: 106 GRRYGLIGLNGSGKSTIIQAIYNKEMP 132
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 430 PSNLEKHTTHRYSKNSFKLHR---LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
P + +H + RY++N+ +++ I + LVG NG GKST LK+L P G
Sbjct: 392 PVIMVQHVSFRYNENTPWIYKDIDFGIDLDTRI-ALVGPNGAGKSTLLKLLCTDVMPTDG 450
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKP 591
G GL+G NG GKST ++ + K+ P
Sbjct: 107 GRRYGLIGLNGSGKSTIIQAIYNKEMP 133
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical protein
K08E7.9 protein.
Length = 1321
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PG+ L LVG +G GKST + +L
Sbjct: 1104 PGQTLALVGPSGCGKSTVVALL 1125
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PG+ L LVG +G GKST + +L
Sbjct: 984 PGKTLALVGPSGCGKSTIISLL 1005
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKIL 573
GE + LVG +G GKST +++L
Sbjct: 350 GECIALVGASGSGKSTVVQLL 370
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PG+ L LVG +G GKST + +L
Sbjct: 1043 PGKTLALVGPSGCGKSTIISLL 1064
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKIL 573
GE + LVG +G GKST +++L
Sbjct: 409 GECIALVGASGSGKSTVVQLL 429
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PG+ L LVG +G GKST + +L
Sbjct: 1043 PGKTLALVGPSGCGKSTIISLL 1064
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKIL 573
GE + LVG +G GKST +++L
Sbjct: 409 GECIALVGASGSGKSTVVQLL 429
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical
protein F22E10.2 protein.
Length = 1324
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKILAGKQKPNLG 600
PG + LVG +G GKST++ +L +P G
Sbjct: 444 PGTSVALVGHSGCGKSTSVGLLTRLYEPEQG 474
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PG+ L LVG +G GKST + +L
Sbjct: 1104 PGQTLALVGPSGCGKSTVVALL 1125
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical protein
C25F6.3 protein.
Length = 1059
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 RMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINI-PSNLEKHTT 456
R+G K+A I +++CI CG C C I P + H T
Sbjct: 942 RIGPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDPVTHQPHVT 994
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 223 RIAIVNADRC-KPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKC 399
++AI++ D C +C C S G I P ++E+ C GC +C C
Sbjct: 955 KVAIIDDDMCINCGKCYMTCNDS------GYQAITFDPVTHQPHVTEDDCTGCTLCYSVC 1008
Query: 400 P 402
P
Sbjct: 1009 P 1009
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 508 PGEVLGLVGQNGIGKSTALKIL 573
PG+ + LVG +G GKST++ +L
Sbjct: 426 PGQTVALVGTSGCGKSTSIGLL 447
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 451 TTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
T HR F L+ IP+ G + LVG +G GKST + +L GR
Sbjct: 1042 TPHRNVCEGFSLN---IPK-GHSIALVGASGCGKSTIISMLERFYSAKAGR 1088
>Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical
protein Y49E10.9 protein.
Length = 454
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNL 597
GE+ ++G +G GK+T L +L G+ L
Sbjct: 132 GELTFIMGSSGAGKTTLLNVLTGRNMDGL 160
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
GE + LVG +G GKST +++L + GR
Sbjct: 433 GECIALVGASGSGKSTVIQLLLHYYNIDSGR 463
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 KHTTHRYSKNSFK--LHRLPIPRP-GEVLGLVGQNGIGKSTALKIL 573
K+ + Y++ S K L + + P G L LVG +G GKST + +L
Sbjct: 1039 KNVSFEYAQRSDKMILDGVSLKLPAGRTLALVGPSGSGKSTIISLL 1084
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 511 GEVLGLVGQNGIGKSTALKILAGKQKPNLGR 603
G+V L+G NG GKST ++ G + G+
Sbjct: 477 GQVSILLGHNGCGKSTTFGMITGMHQATEGK 507
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 450 HYPPLLQKLIQAPSPAYPKTRRSSRSCW-PERYR-KVYCTED 569
HYP LLQK+I +P++ + S + PE Y+ K+ T +
Sbjct: 179 HYPQLLQKIIIVNAPSFVNVLHQACSPFLPEDYKEKIVITSE 220
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKIL 573
+ GE + LVG +G GKST +++L
Sbjct: 406 KQGECIALVGASGSGKSTIVQLL 428
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKIL 573
+ GE + LVG +G GKST +++L
Sbjct: 406 KQGECIALVGASGSGKSTIVQLL 428
>Z68751-9|CAA92979.2| 238|Caenorhabditis elegans Hypothetical
protein T05E11.7 protein.
Length = 238
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 447 THYPPLLQKLIQAPSPAYPKTRRSSRSCWP 536
T P L I++P P P+T++SS+S P
Sbjct: 14 TASPAALPSSIESPGPPVPQTQKSSKSQQP 43
>Z68337-11|CAA92754.2| 238|Caenorhabditis elegans Hypothetical
protein T05E11.7 protein.
Length = 238
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 447 THYPPLLQKLIQAPSPAYPKTRRSSRSCWP 536
T P L I++P P P+T++SS+S P
Sbjct: 14 TASPAALPSSIESPGPPVPQTQKSSKSQQP 43
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 158 LICGTKYDYNLNSCIIC---LLNFQFRTHLFLIYKFFTS 51
L +K + L +C C L NF RT IY FTS
Sbjct: 7144 LFVKSKVSFTLENCFSCNLKLRNFNSRTQFGSIYSIFTS 7182
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 505 RPGEVLGLVGQNGIGKSTALKIL 573
+ GE+L L+G +G GK+T L +L
Sbjct: 59 KSGELLALMGASGAGKTTLLNML 81
>AL032646-1|CAA21676.1| 385|Caenorhabditis elegans Hypothetical
protein Y54E2A.2 protein.
Length = 385
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 517 VLGLVGQNGIGKSTALKILAGKQKPNLGR 603
V+ +G G GKST L +LAG + R
Sbjct: 88 VISAIGPQGAGKSTLLSMLAGNNSRQMYR 116
>AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm
receptor protein 120 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 421 INIPSNLEKHTTHRYSKNSFKLHR 492
+NI + +HT HR SK ++++HR
Sbjct: 223 LNIFRTVYRHTKHRKSKKNWEIHR 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,232,937
Number of Sequences: 27780
Number of extensions: 361587
Number of successful extensions: 1264
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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