Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g06
         (297 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   6.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   8.5  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 161 WYSVGLLVLPL 129
           WYS+ + ++PL
Sbjct: 206 WYSISVFMVPL 216


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 170 LIYFSLQFKCI 202
           L+YF L F CI
Sbjct: 166 LVYFILAFACI 176


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 268 LYLINIIHFYN*TFLVIISFLFY 200
           L+L  I +FY+   +  I  LFY
Sbjct: 207 LFLPCIYYFYSAFIIFTIHLLFY 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,511
Number of Sequences: 336
Number of extensions: 1116
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5322850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)