Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g02
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.5  

>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 119 WLKDPFKCA*SSILGNSLQKKLRSMTRKTQLKEV 18
           W+K+      SS   N L ++LR+    TQL E+
Sbjct: 117 WMKEKKTTRKSSQQENGLPRRLRTAYTNTQLLEL 150


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 319 FQEDGCCYIELRSTPRDTQYITK 387
           F  DGC     RS  R+ QY+ K
Sbjct: 53  FACDGCAGFFKRSIRRNRQYVCK 75


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 319 FQEDGCCYIELRSTPRDTQYITK 387
           F  DGC     RS  R+ QY+ K
Sbjct: 53  FACDGCAGFFKRSIRRNRQYVCK 75


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 43  VMDLNFFCKELPKIELHAHLNGSLSQATMLQL 138
           ++ +  +CKE+   E+   + GSL    +L +
Sbjct: 60  IIYVRIYCKEIRFFEISFEILGSLDSLILLMV 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,016
Number of Sequences: 336
Number of extensions: 3702
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)