Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2g01
         (361 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    23   1.5  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   1.5  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   1.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   3.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   5.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   7.7  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 NNRFCNKYLIYNLKYISPL 286
           NN   NK L YN+ YI  +
Sbjct: 98  NNNNYNKKLYYNINYIEQI 116


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 NNRFCNKYLIYNLKYISPL 286
           NN   NK L YN+ YI  +
Sbjct: 100 NNNNYNKKLYYNINYIEQI 118


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 NNRFCNKYLIYNLKYISPL 286
           NN   NK L YN+ YI  +
Sbjct: 100 NNNNYNKKLYYNINYIEQI 118


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 NNRFCNKYLIYNLKYISPL 286
           NN   NK L YN+ YI  +
Sbjct: 100 NNNNYNKKLYYNINYIEQI 118


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 NNRFCNKYLIYNLKYISPL 286
           NN   NK L YN+ YI  +
Sbjct: 100 NNNNYNKKLYYNINYIEQI 118


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 NNRFCNKYLIYNLKYISPL 286
           NN   NK L YN+ YI  +
Sbjct: 336 NNNNYNKKLYYNINYIEQI 354


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 158 WNKCIVNRKTHSIVTDF 108
           W+KCI++ ++++   DF
Sbjct: 111 WDKCILSSESYNPQVDF 127


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 348 TTELYFILRNSQTIYYDSIRP 286
           T  LY+   +S+++YY + +P
Sbjct: 263 TNNLYYSPLSSRSLYYVNTKP 283


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 8   CIYCITIKCIVNCKINDSCIFGYI 79
           C YC   KCI      D+  FG +
Sbjct: 120 CQYCRLKKCIAVGMSRDAVRFGRV 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,001
Number of Sequences: 438
Number of extensions: 1360
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)