Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2f24
(513 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 236 9e-63
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 235 1e-62
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 231 3e-61
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 8e-45
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 137 6e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 112 1e-25
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 109 1e-24
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 108 2e-24
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 107 5e-24
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 106 9e-24
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 6e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 79 2e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 56 2e-08
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 52 2e-07
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 51 5e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 49 2e-06
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 44 7e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 40 0.002
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.045
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.0
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 28 3.9
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 236 bits (577), Expect = 9e-63
Identities = 108/122 (88%), Positives = 110/122 (90%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVH QAGQCGNQIGAKFWEVISD HG D TG Y GDSDLQLERINVYYNE + GKYV
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQIFRPDNF FGQSGAGNNWAKGHY GAELVDSVLDVV
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 506 RK 511
RK
Sbjct: 334 RK 335
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 235 bits (576), Expect = 1e-62
Identities = 107/122 (87%), Positives = 110/122 (90%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVH QAGQCGNQIGAKFWEVISD HG D TG Y GDSDLQLERINVYYNE + GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRA++VDLEPGTMDSVRSGPFGQIFRPDNF FGQSGAGNNWAKGHY GAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 231 bits (564), Expect = 3e-61
Identities = 104/122 (85%), Positives = 110/122 (90%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IV +QAGQCGNQIGAKFWEVISD HG D TG Y GDSDLQLERINVYYNE + GKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR+V++DLEPGTMDSVRSGPFGQIFRPDNF FGQSGAGNNWAKGHY GAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 176 bits (429), Expect = 8e-45
Identities = 79/92 (85%), Positives = 82/92 (89%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVH QAGQCGNQIGAKFWEVISD HG D TG Y GDSDLQLERINVYYNE + GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXF 421
PRA++VDLEPGTMDSVRSGPFGQIFRPDNF F
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 137 bits (331), Expect = 6e-33
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = +2
Query: 314 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSV 493
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNF FGQSGAGNNWAKGHY GAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 494 LDVVRK 511
LDVVRK
Sbjct: 62 LDVVRK 67
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 112 bits (270), Expect = 1e-25
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = +2
Query: 314 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSV 493
G+YVPR+++VDLEPGTMD+VR GP G +FRPDNF QSGA NNWAKGHY GAEL+D++
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 494 LDVVRK 511
DV+RK
Sbjct: 73 FDVLRK 78
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 109 bits (263), Expect = 1e-24
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGK 319
MR + I GQ G QIG WE+ HG G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 500 VVRK 511
+RK
Sbjct: 121 RIRK 124
Score = 107 bits (258), Expect = 4e-24
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKY 322
R + I GQ G QIG WE+ HG G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 503 VRK 511
+RK
Sbjct: 555 IRK 557
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 108 bits (260), Expect = 2e-24
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGK 319
+R + I GQ G QIG WE+ HG G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 500 VVRK 511
+RK
Sbjct: 706 RIRK 709
Score = 108 bits (259), Expect = 3e-24
Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +2
Query: 143 IMRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXG 316
+ R + + GQ G QIG WE+ HG G D + + N +++E G
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Query: 317 KYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVL 496
K+VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E+VD VL
Sbjct: 124 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 183
Query: 497 DVVRK 511
D +RK
Sbjct: 184 DRIRK 188
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKY 322
R + I GQ G QIG WE+ HG G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 323 VPRAVMVDLEPGTMDSV 373
VPRAV VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 107 bits (257), Expect = 5e-24
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKY 322
R + I GQ G QIG WE+ HG G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 503 VRK 511
+RK
Sbjct: 121 IRK 123
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 106 bits (255), Expect = 9e-24
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGK 319
MR + I GQ G Q+G WE+ HG G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 500 VVRK 511
RK
Sbjct: 121 RCRK 124
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 106 bits (254), Expect = 1e-23
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGK 319
MR + + GQ G Q+G WE+ HG G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAV DLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 500 VVRK 511
+RK
Sbjct: 121 RLRK 124
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 105 bits (251), Expect = 3e-23
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKY 322
R V I GQ G Q+G WE+ HG G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRAV VDLEP +D +R+G + Q+F P+ G+ A NN+A+GHY G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 503 VRK 511
+RK
Sbjct: 540 IRK 542
Score = 90.2 bits (214), Expect = 9e-19
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Frame = +2
Query: 191 IGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKYVPRAVMVDLEPGTM 364
+G WE+ HG G D + + N +++E GK+VPRAV DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 365 DSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
D VR+G + Q+F P+ G+ A NN+A+GHY G +L++ VLD +RK
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRK 109
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 104 bits (249), Expect = 5e-23
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKY 322
R + + GQ G Q+G WE+ HG G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRAV DLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 503 VRK 511
+RK
Sbjct: 926 IRK 928
Score = 103 bits (248), Expect = 7e-23
Identities = 51/123 (41%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGKY 322
R + I GQ G QIG WE+ HG G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ G+ A NN+A+GHY G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 503 VRK 511
+RK
Sbjct: 493 LRK 495
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 84.2 bits (199), Expect = 6e-17
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +2
Query: 278 ERINVYYNEXSXGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKG 457
+ N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 458 HYXXGAELVDSVLDVVRK 511
HY G E +D LD +RK
Sbjct: 72 HYTVGKEHIDLALDRIRK 89
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 81.8 bits (193), Expect = 3e-16
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +2
Query: 299 NEXSXGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAE 478
+E + GKYVPRAV+VDLEP +D VR+G + ++ P+ G+ A NN+A+GHY G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 479 LVDSVLDVVRK 511
+V+ V+D +RK
Sbjct: 1025 MVEVVMDKIRK 1035
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 79.0 bits (186), Expect = 2e-15
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGK 319
MR + I GQ G QIG WE+ HG G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAV VDLEP + P+ G+ A NN+A+GHY G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 500 VVRK 511
+RK
Sbjct: 111 RLRK 114
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 365 DSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
D VR+G + Q+F P+ G+ A NN+A+GHY G EL+D VLD +RK
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 61
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 57.6 bits (133), Expect = 6e-09
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQL--ERINVYYNEXSXGK 319
MR + + GQ G QIG WE+ HG G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 320 YVPRAVMVDLEPGTMDSVR 376
+VPRAV VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
VR+G + Q+F P+ G+ A NN+A+GHY G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
VR+G + Q+F P+ G+ A NN+A+GHY G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 52.4 bits (120), Expect = 2e-07
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 155 IVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLE-RINVYYNEXSXGKYVPR 331
IV +Q GQCGNQIG + +++I + DAT S +L R Y E S ++ R
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVE----DATKLNSRFLCKELTTRSCTEYEEESLARFFTR 58
Query: 332 ---------AVMVDLEPGTMDSVRS--GPFGQIFRPDNFXFGQS-GAGNNWAKGHYXXGA 475
AV +D+E + S G P F Q G+GNNWA G G
Sbjct: 59 ENDDILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGP 118
Query: 476 ELVDSVLDVVRK 511
+ +D VLD+V++
Sbjct: 119 KSIDKVLDLVQR 130
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 51.2 bits (117), Expect = 5e-07
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
+R+G + Q+F P+ G+ A NN+A+GHY G E +D LD +RK
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
VR G + +F PD G+ A NN+A+GHY G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 425 QSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
Q+ A NNWAKG Y GAEL+DS +D +RK
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRK 30
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 329 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNW 448
RAV++D+E G ++++ GP +F SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 203 FWEVISDXHGXDATGAYSG-DSDLQLERINVYYNE 304
FWEVI++ HG D G + S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGD--SDLQLERINVYYNEXSXGK 319
MR + I GQ G QIG WE+ HG G D +D + + +++E + GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 320 Y 322
+
Sbjct: 256 H 256
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -1
Query: 435 APDCPKXKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 313
A DCP + +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 475 SPLXVMSFRPVIPRPRLSEXEVVRSEDL 392
+P + +F+P P RLSE E+VR DL
Sbjct: 407 NPKSLKAFQPFWPAIRLSELELVRRSDL 434
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 270 CSLNASMSTITXLXGASTSREL*WWTLSLE 359
CSLN S S+ L G S R + +W SLE
Sbjct: 907 CSLNDSPSSSIMLEGYSLGRAVDYWVYSLE 936
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,019
Number of Sequences: 59808
Number of extensions: 284726
Number of successful extensions: 685
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -