Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2f24
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 236 6e-63
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 229 7e-61
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 228 2e-60
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 228 2e-60
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 224 3e-59
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 223 6e-59
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 161 4e-40
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 161 4e-40
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 112 2e-25
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 112 2e-25
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 110 5e-25
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 110 5e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 110 7e-25
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 110 7e-25
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 106 1e-23
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 106 1e-23
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 106 1e-23
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 105 1e-23
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 105 1e-23
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 105 1e-23
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 104 4e-23
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 100 7e-22
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 90 1e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 90 1e-18
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 81 5e-16
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 33 0.16
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 33 0.16
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 1.5
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 1.5
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 29 1.5
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 6.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 236 bits (578), Expect = 6e-63
Identities = 107/122 (87%), Positives = 112/122 (91%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVHIQAGQCGNQIGAKFWEVISD HG D TGAY+GDSDLQLERINVYYNE S GKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRA +VDLEPGTMDSVR+GPFGQ+FRPDNF FGQSGAGNNWAKGHY GAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 229 bits (561), Expect = 7e-61
Identities = 103/122 (84%), Positives = 109/122 (89%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVH+QAGQCGNQIGAKFWEVISD HG G Y G+SDLQLERINVYYNE + GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNF FGQSGAGNNWAKGHY GAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 228 bits (558), Expect = 2e-60
Identities = 103/122 (84%), Positives = 109/122 (89%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVHIQAGQCGNQIG+KFWEVISD HG D +G Y GDSDLQLERINVYYNE KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+ FGQSGAGNNWAKGHY GAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 228 bits (558), Expect = 2e-60
Identities = 103/122 (84%), Positives = 109/122 (89%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVHIQAGQCGNQIG+KFWEVISD HG D +G Y GDSDLQLERINVYYNE KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+ FGQSGAGNNWAKGHY GAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 224 bits (548), Expect = 3e-59
Identities = 99/122 (81%), Positives = 109/122 (89%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVH+QAGQCGNQIG+KFWEVISD HG G + G+SDLQLERI+VYYNE + GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNF FGQSGAGNNWAKGHY GAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 223 bits (545), Expect = 6e-59
Identities = 98/122 (80%), Positives = 109/122 (89%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR IVH+QAGQCGNQIG+KFWEVISD HG G + G++DLQLERI+VYYNE + GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNF FGQSGAGNNWAKGHY GAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 506 RK 511
RK
Sbjct: 121 RK 122
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 161 bits (390), Expect = 4e-40
Identities = 68/122 (55%), Positives = 91/122 (74%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
M+ I+++Q GQCGNQIGAKFWE IS+ HG G Y GD+ QLERI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRA++VDL+P +++ VRS +G++F P+N G+SGAGNNW++G+Y GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 161 bits (390), Expect = 4e-40
Identities = 68/122 (55%), Positives = 91/122 (74%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
M+ I+++Q GQCGNQIGAKFWE IS+ HG G Y GD+ QLERI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRA++VDL+P +++ VRS +G++F P+N G+SGAGNNW++G+Y GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 112 bits (269), Expect = 2e-25
Identities = 47/122 (38%), Positives = 71/122 (58%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 112 bits (269), Expect = 2e-25
Identities = 47/122 (38%), Positives = 71/122 (58%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 110 bits (265), Expect = 5e-25
Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLE--RINVYYNEXSXGK 319
MR IV I GQ G QIG WE+ HG G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRA+ VDLEP +D VR+G + ++F P+ G+ A NN+A+GHY G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 500 VVRK 511
VR+
Sbjct: 121 RVRR 124
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 110 bits (265), Expect = 5e-25
Identities = 51/122 (41%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDS-DLQLERINVYYNEXSXGKYV 325
R V I GQ G QIG WE+ HG D G + + + + + +++E GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PRA+ VDLEP +D +R+G +G +F PD G+ A NN+A+GHY G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 506 RK 511
RK
Sbjct: 126 RK 127
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 110 bits (264), Expect = 7e-25
Identities = 47/122 (38%), Positives = 72/122 (59%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 110 bits (264), Expect = 7e-25
Identities = 47/122 (38%), Positives = 72/122 (59%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 106 bits (254), Expect = 1e-23
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDL--QLERINVYYNEXSXGK 319
MR ++ I GQ G QIG WE+ HG G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAVMVDLEP +D +R+G + +F P+ G+ A NN+A+GHY G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 500 VVRK 511
+R+
Sbjct: 121 RIRR 124
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 106 bits (254), Expect = 1e-23
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDL--QLERINVYYNEXSXGK 319
MR ++ I GQ G QIG WE+ HG G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAVMVDLEP +D +R+G + +F P+ G+ A NN+A+GHY G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 500 VVRK 511
+R+
Sbjct: 121 RIRR 124
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 106 bits (254), Expect = 1e-23
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDL--QLERINVYYNEXSXGK 319
MR ++ I GQ G QIG WE+ HG G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLD 499
+VPRAVMVDLEP +D +R+G + +F P+ G+ A NN+A+GHY G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 500 VVRK 511
+R+
Sbjct: 121 RIRR 124
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 105 bits (253), Expect = 1e-23
Identities = 44/122 (36%), Positives = 70/122 (57%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 105 bits (253), Expect = 1e-23
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLE--RINVYYNEXSXGKY 322
R ++ I GQ G Q+G WE+ HG G + + L ++ N +++E GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRA+MVDLEP +D +R+G + +F P+ G+ A NN+A+GHY G E++D V+D
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDR 126
Query: 503 VRK 511
VR+
Sbjct: 127 VRR 129
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 105 bits (253), Expect = 1e-23
Identities = 44/122 (36%), Positives = 70/122 (57%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 506 RK 511
R+
Sbjct: 121 RR 122
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 104 bits (249), Expect = 4e-23
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDL--QLERINVYYNEXSXGKY 322
R ++ I GQ G QIG WE+ HG G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPRAVMVDLEP +D +R+G + +F P+ G+ A NN+A+GHY G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 503 VRK 511
+R+
Sbjct: 121 IRR 123
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 101 bits (241), Expect = 4e-22
Identities = 44/122 (36%), Positives = 72/122 (59%)
Frame = +2
Query: 146 MRXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYV 325
MR ++ I GQ G QIG WE+ HG G S + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVV 505
PR++ VDLEP +D +R+G + ++F P+ G+ A NN+A+GHY G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 506 RK 511
R+
Sbjct: 120 RR 121
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 100 bits (239), Expect = 7e-22
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 149 RXIVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDS--DLQLERINVYYNEXSXGKY 322
R ++ I GQ G QIG WE+ HG G + D D + E IN ++ E + GK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDV 502
VPR + VDLEP +D VR+G + +F P+ G+ A N +A+G Y G E++D V+D
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 503 VRK 511
V++
Sbjct: 128 VKR 130
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +2
Query: 155 IVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYVPRA 334
++ + GQCGNQ+ FW+ + D HG + G + + D+ ++ ++Y + YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 335 VMVDLEPGTMDSVRSGP-FGQIFRPDNFXFGQ--SGAGNNWAKGHYXXGAELVDSVLDVV 505
V+VDLEP ++ + P F +F DN GAGNNWA G Y G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +2
Query: 155 IVHIQAGQCGNQIGAKFWEVISDXHGXDATGAYSGDSDLQLERINVYYNEXSXGKYVPRA 334
++ + GQCGNQ+ FW+ + D HG + G + + D+ ++ ++Y + YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 335 VMVDLEPGTMDSVRSGP-FGQIFRPDNFXFGQ--SGAGNNWAKGHYXXGAELVDSVLDVV 505
V+VDLEP ++ + P F +F DN GAGNNWA G Y G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 81.0 bits (191), Expect = 5e-16
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = +2
Query: 227 HGXDATGAYSGDS--DLQLERINVYYNEXSXGKYVPRAVMVDLEPGTMDSVRSGPFGQIF 400
HG G + D D + E IN ++ E + GK+VPR + VDLEP +D VR+G + +F
Sbjct: 6 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 65
Query: 401 RPDNFXFGQSGAGNNWAKGHYXXGAELVDSVLDVVRK 511
P+ G+ A N +A+G Y G E++D V+D V++
Sbjct: 66 HPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 102
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 156 SSTSRRVNAGIRSEQSSGK*SRTXTALTPRVLTAATPTCSLNASMSTITXLXGAST 323
SSTSR + +E SS S T TA T + TPT + AS ST+T + ++T
Sbjct: 213 SSTSRSTSTPSSTEASSTVTSTT-TARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 267
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 156 SSTSRRVNAGIRSEQSSGK*SRTXTALTPRVLTAATPTCSLNASMSTITXLXGAST 323
SSTSR + +E SS S T TA T + TPT + AS ST+T + ++T
Sbjct: 195 SSTSRSTSTPSSTEASSTVTSTT-TARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 249
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 295 VDIDAFKLQVGVAAVSTRGVXAVXVR 218
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 295 VDIDAFKLQVGVAAVSTRGVXAVXVR 218
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 295 VDIDAFKLQVGVAAVSTRGVXAVXVR 218
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 295 VDIDAFKLQVGVAAVSTRGVXAVXVR 218
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 295 VDIDAFKLQVGVAAVSTRGVXAVXVR 218
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 295 VDIDAFKLQVGVAAVSTRGVXAVXVR 218
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 102 YLIFDSGGSKFLVQS*GXSSTSRRVNAGIRSEQSSGK*SRTXTALTPRVLTAATPTCSL 278
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,187,560
Number of Sequences: 27780
Number of extensions: 218978
Number of successful extensions: 605
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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