Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f19
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.13 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 259 VYDRDATNKKESPDNSTSETSGDSLTNAGKEVKGRTHTF 375
           VY+    N K +PDN+T  T  D  T    E++  T TF
Sbjct: 435 VYNVQIENLKTTPDNTTFITLVDVSTKRRTELEDLTPTF 473


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 511 IIPYASVERVPLQHELFDK 567
           ++PY + E+  L+H+L+ K
Sbjct: 23  LVPYYNFEKFSLEHQLWQK 41


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 603 HCPRDPAGVAEEEPSL 650
           HCPR     A EEP +
Sbjct: 106 HCPRKHGYFAHEEPHI 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,729
Number of Sequences: 336
Number of extensions: 3574
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)