Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f18
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.74 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.2  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   6.9  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.1  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 534 GSSQKCFQEIHREWKDYR 481
           G S+K  QEI  EWK +R
Sbjct: 50  GVSRKNVQEIRLEWKSFR 67


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 241 PKAPWPHPG*LASCD*LLPC 182
           P  P+P PG L S    +PC
Sbjct: 209 PSTPYPPPGSLGSMGVSVPC 228


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 260 LKLKTSDCPCSYRRPW 307
           L  K + CP ++ RPW
Sbjct: 6   LPCKCTICPKAFSRPW 21


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 554 NQAYK*HNHYQYSF 595
           NQAY  +N+YQ  F
Sbjct: 218 NQAYSNYNNYQEGF 231


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 554 NQAYK*HNHYQYSF 595
           NQAY  +N+YQ  F
Sbjct: 238 NQAYSNYNNYQEGF 251


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 141 ECSWNEGSSAT 173
           EC+W+ G +AT
Sbjct: 17  ECNWSSGPNAT 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,368
Number of Sequences: 336
Number of extensions: 2728
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)