Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f12
         (484 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical pr...    29   2.3  

>U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical
           protein B0252.1 protein.
          Length = 727

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 12/63 (19%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = -2

Query: 393 IGDEKHDAPIHMHFDRFNLCRLLNVLLACVMYRSCEKKKTFIFNKT*HFQFIEL-VKLII 217
           I ++K  + +++    FN+ +L+ V+ + +   +C+  +T ++++  H Q I+  ++L++
Sbjct: 230 IHEDKPSSDVYVFMTSFNVSQLMRVVESTINGPTCQMSQTKMYSQFVHSQIIKTHIRLVM 289

Query: 216 SRN 208
             +
Sbjct: 290 DED 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,419,189
Number of Sequences: 27780
Number of extensions: 175990
Number of successful extensions: 284
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)