Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2f10
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 40 0.001
SB_29580| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-38) 31 0.60
SB_9638| Best HMM Match : WD40 (HMM E-Value=8.4e-09) 31 0.79
SB_45440| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_23074| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_25832| Best HMM Match : fn3 (HMM E-Value=4.2e-08) 29 2.4
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 29 3.2
SB_17575| Best HMM Match : CBM_19 (HMM E-Value=9.6) 29 4.2
SB_24931| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 28 5.6
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 28 5.6
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 28 7.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_59377| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7) 27 9.7
SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_48882| Best HMM Match : DUF204 (HMM E-Value=4.1) 27 9.7
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5) 27 9.7
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 27 9.7
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_59058| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Frame = +3
Query: 273 KIDVKSCVKAEPPHPC-DPIVP-CDPLKQEEGECPTP-----SLCVEKLKNPAHAGEITK 431
K+ V CV +P PC DP+ P DP+K C P + CV+ +K P+ +G T
Sbjct: 546 KVAVTPCV--DPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPCVDPVKVPSESGSDTL 603
Query: 432 CLPGKFINVTSCAKEDPPHPCDALACNTDLTKRRPCSDP 548
C P + + T C + +T PC DP
Sbjct: 604 CRPSESGSDTPCRPSESGSDTHVDPVKVSVT---PCVDP 639
Score = 33.9 bits (74), Expect = 0.11
Identities = 40/170 (23%), Positives = 58/170 (34%), Gaps = 4/170 (2%)
Frame = +3
Query: 120 PCLGPVTVQKLQDGKPLMPEDRNHDSCACSDQKNQEDRHR*TNSKMTKNVAKIDVKSCVK 299
PC+ PV V L + C K+ D S+++ V CV
Sbjct: 646 PCVDPVKVPSESGSDTLCRPSESGSDTLCRPSKSVSDTPC-RPSEVSVTPCVDPVTPCVS 704
Query: 300 AEPPHPCDPIVP--CDPLKQEEGECPTPSLCV-EKLKNPAHAGEITKCLPGKFINVTSCA 470
P + + C P K PS V + L P+ +G T C P + ++ T C
Sbjct: 705 DTLCRPSESVSDTLCRPSKSGSDTLCRPSESVSDTLCRPSESGSDTLCRPSESVSDTPCR 764
Query: 471 KEDPPHPCDALACNTDLTKRRPCSDP-PLCVQRIKNPVTEKEKVDSCDTP 617
+ +T PC DP + V +PV K V C P
Sbjct: 765 PSESGSDTHVDPVKVSVT---PCVDPVKVAVTPYVDPV--KVSVTPCVDP 809
Score = 31.1 bits (67), Expect = 0.79
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 327 IVPC-DPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAKEDPPHPCDAL 503
+ PC DP+K TP CV+ +K P+ +G T C P + + T C P
Sbjct: 633 VTPCVDPVKVSV----TP--CVDPVKVPSESGSDTLCRPSESGSDTLCR---PSKSVSDT 683
Query: 504 ACNTDLTKRRPCSDP 548
C PC DP
Sbjct: 684 PCRPSEVSVTPCVDP 698
>SB_29580| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-38)
Length = 130
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 279 DVKSCVKAEPPHPCDPIVPCDPLKQEEGECPTPSLCVEKLK 401
D K+CVK + P P P+ P + Q C S CV+++K
Sbjct: 74 DEKNCVKPQTPPPTPPLKPKCRISQR--RCDNGSGCVDRMK 112
>SB_9638| Best HMM Match : WD40 (HMM E-Value=8.4e-09)
Length = 781
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +3
Query: 294 VKAEPPHPCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
++ + PCDP++ PCDPL Q++G P L + +P
Sbjct: 192 IQQDGSSPCDPLIQQVGSSPCDPLIQQDGSSPCDPLIQQVGSSP 235
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q++G P L + +P
Sbjct: 235 PCDPLIQQVGSSPCDPLIQQDGSSPCEPLIQQVGSSP 271
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q++G P L + +P
Sbjct: 295 PCDPLIQQVGSSPCDPLIQQDGSSPCDPLIQQVGSSP 331
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Frame = +3
Query: 294 VKAEPPHPCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
++ + PCDP++ PCDPL Q+ G P L + +P
Sbjct: 312 IQQDGSSPCDPLIQQVGSSPCDPLIQQVGSSPCDPLIQQVGSSP 355
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q+ G P L + +P
Sbjct: 115 PCDPLIQQVGSSPCDPLIQQVGSSPCDPLIQQVGSSP 151
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q+ G P L + +P
Sbjct: 127 PCDPLIQQVGSSPCDPLIQQVGSSPCDPLIQQVGSSP 163
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q+ G P L + +P
Sbjct: 139 PCDPLIQQVGSSPCDPLIQQVGSSPCDPLIQQVGSSP 175
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q+ G P L + +P
Sbjct: 211 PCDPLIQQDGSSPCDPLIQQVGSSPCDPLIQQVGSSP 247
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q+ G P L + +P
Sbjct: 271 PCDPLIQQVGSSPCDPLIQQVGSSPCDPLIQQVGSSP 307
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP++ PCDPL Q+ G P L + +P
Sbjct: 307 PCDPLIQQDGSSPCDPLIQQVGSSPCDPLIQQVGSSP 343
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
PCDP + PCDPL Q++G P L + +P
Sbjct: 175 PCDPHIQQVGSSPCDPLIQQDGSSPCDPLIQQVGSSP 211
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%)
Frame = +3
Query: 315 PCDPIV------PCDPLKQEEGECPTPSL 383
PCDP++ PCDPL Q+ G P L
Sbjct: 331 PCDPLIQQVGSSPCDPLIQQVGSSPCDPL 359
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Frame = +3
Query: 294 VKAEPPHPCDPIV------PCDPLKQEEGECPTPSLCVEKLKNP 407
++ + PC+P++ PCDPL Q+ G P L + +P
Sbjct: 252 IQQDGSSPCEPLIQQVGSSPCDPLIQQVGSSPCDPLIQQVGSSP 295
>SB_45440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 270 AKIDVKSCVKAEPPHPCDPIVPCDPLK 350
A+I K C EP PC+P PC+P K
Sbjct: 4 ARISYKPC---EPYKPCEPYKPCEPYK 27
>SB_23074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 15 RHQNRIEKWNCRFHKMSDNNNSCTQNCKTQKNK 113
+H R + HKMS+ NN TQ+ +T ++K
Sbjct: 277 QHNTRCQNRTTEQHKMSEQNNRTTQDVRTAQHK 309
>SB_25832| Best HMM Match : fn3 (HMM E-Value=4.2e-08)
Length = 313
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 214 WSEQAQESWFRSSGIRGFPSWSFWT 140
WSE +Q+S+ R G++GF S S T
Sbjct: 127 WSEYSQDSFLRGVGVKGFRSGSVIT 151
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 24 NRIEKWNCRFHKMS--DNNNSCTQNCKTQKNKCQPCLGPVTVQKLQDGKP 167
N + K N R + +NN C Q C+T N + C G + + ++ KP
Sbjct: 602 NLVRKLNNRASSLELRENNAQCRQTCRTPPNYAELC-GSLWISRITRKKP 650
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 29.1 bits (62), Expect = 3.2
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 9/113 (7%)
Frame = +3
Query: 306 PPH-PCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAKEDP 482
P H P + PC C +P V +P + P V C P
Sbjct: 123 PCHSPPTAVRPCHSPPTAVRPCHSPPNTVRPCHSPPNTVRPCHSPPN---TVRPC--HSP 177
Query: 483 P---HPCDALA-----CNTDLTKRRPCSDPPLCVQRIKNPVTEKEKVDSCDTP 617
P HPC + C++ LT RPC PP V+ +P T V C +P
Sbjct: 178 PNTVHPCHSPLTAVHPCHSPLTAVRPCHSPPNTVRPCHSPPT---AVHPCHSP 227
Score = 27.9 bits (59), Expect = 7.4
Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
Frame = +3
Query: 306 PPH-PCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAKEDP 482
P H P + + PC C +P V +P A P V C P
Sbjct: 163 PCHSPPNTVRPCHSPPNTVHPCHSPLTAVHPCHSPLTAVRPCHSPPN---TVRPC--HSP 217
Query: 483 PHPCDALACNTDLTKRRPCSDPPLCVQRIKNPVTEKEKVDSCDTP 617
P C++ LT RPC PP V+ +P V C +P
Sbjct: 218 PTAVHP--CHSPLTAVRPCHSPPNTVRPCHSP---PNTVHPCHSP 257
Score = 27.5 bits (58), Expect = 9.7
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 12/101 (11%)
Frame = +3
Query: 312 HPC----DPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAKED 479
HPC + + PC C +P V +P A P V C
Sbjct: 22 HPCHSPPNTVHPCHSPPNTVRPCHSPPNTVRPCHSPPTAVHPCHSPPTA---VRPC--HS 76
Query: 480 PP---HPCDA-----LACNTDLTKRRPCSDPPLCVQRIKNP 578
PP HPC + C++ LT PC PP V +P
Sbjct: 77 PPTAVHPCHSPPNTVRPCHSPLTAVHPCHSPPTAVHPCHSP 117
>SB_17575| Best HMM Match : CBM_19 (HMM E-Value=9.6)
Length = 139
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 309 PHPCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAKEDPPH 488
P+PC+ +V KQ + CPT L VE K C + + T + P+
Sbjct: 73 PYPCNELVEPTKGKQRKYPCPTHEL-VEPTKGKQRK---YPCPTHELVEPTKGKQRKYPY 128
Query: 489 PCDAL 503
PC L
Sbjct: 129 PCHEL 133
>SB_24931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 8 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 49
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 23 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 64
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 38 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 79
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 53 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 94
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 68 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 109
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 83 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 124
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 98 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 139
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 113 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 154
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 128 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 169
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 143 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 184
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 411 HAGEITKCLP-GKFINVTSCAKEDPPHPCDALACNTDLTKRRPCS 542
H +T+ P +++VT+ ++ P C A T+LT+++PCS
Sbjct: 158 HVTNLTRQKPCSAYLHVTNLTRQKP---CSAYLHVTNLTRQKPCS 199
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 303 EPPHPCDPIVPCDP--LKQEEGECPTPSLCV 389
+P PCDP C P +E ECP+ + C+
Sbjct: 1189 KPDGPCDPGYYCPPRSSSSKEIECPSGTYCI 1219
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 411 HAGEITKCLPGKFINVTSCAKEDPPHPCDALACNTDLTK 527
H + + + K+IN SCAK +P D++ C ++ K
Sbjct: 420 HVTRLDESMFPKYINELSCAKSNPAAYADSIRCFYNMGK 458
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Frame = +3
Query: 318 CDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITK----CLPGKFINVTSCAKEDPP 485
C PC L G C + + V + + G+ C P +N SC K
Sbjct: 769 CTTADPCMRLACVHGACVSSNGVVRCECSAGYLGKSCNMTDPCEPSPCLNGGSCTKSGLA 828
Query: 486 HPCDAL----ACNTDLTKRRPCSDPP 551
H C+ N +TKR C D P
Sbjct: 829 HSCECTPGYEGANCSITKR--CGDAP 852
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 36 KWNCRFHKMSDNNNSCTQNCKTQKNKCQP 122
K +C H S+++N+C Q C T + C+P
Sbjct: 1296 KPSCPVHCCSEHSNACPQECST--DNCKP 1322
>SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 279 DVKSCVKAE-PPHPCDPIVPC 338
+V +CV AE P P DP+VPC
Sbjct: 413 EVSTCVNAEFNPCPWDPMVPC 433
>SB_59377| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7)
Length = 839
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 69 NNNSCTQNCKTQKNKCQPCLGPVTVQKLQDGKPLMPEDRNHDSCACSDQKNQEDRHR 239
NN S ++C T KNK C P V + D + + + C D + D+ +
Sbjct: 189 NNGSAKKDCATSKNKAS-CRTPALVCPVCD-NAVKCNQKRYICATCKDTSHARDKKK 243
>SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1057
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 159 GKPLMPEDRNHDSCAC-SDQK 218
G+PL+PED ++CAC D+K
Sbjct: 6 GRPLVPEDDLKEACACICDEK 26
>SB_48882| Best HMM Match : DUF204 (HMM E-Value=4.1)
Length = 165
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -2
Query: 329 NRVTRVRRFG-FHTRFDVDFCNVFSHFA-VCSSVSVFLIFLVRTSAGVVVPVF 177
+RV+R+RR + R F F C S++VF+ LV + GV + F
Sbjct: 30 DRVSRIRRQETYFYRLKAGVLATFQTFLYTCQSIAVFITLLVLIATGVSLDTF 82
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 518 PYKEAPLFGPSIVCA 562
PY+E PL+GP IV A
Sbjct: 448 PYEELPLYGPDIVAA 462
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -2
Query: 329 NRVTRVRRFG-FHTRFDVDFCNVFSHFA-VCSSVSVFLIFLVRTSAGVVVPVF 177
+RV+R+RR + R F F C S++VF+ LV + GV + F
Sbjct: 257 DRVSRIRRQETYFYRLKAGVLATFQTFLYTCQSIAVFITLLVLIATGVSLDTF 309
>SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)
Length = 402
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/79 (29%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 309 PHPCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGE-ITKCLPGKFINVTSCAKEDPP 485
PH D +PC P ++ TP H + T C P TSC P
Sbjct: 308 PHTKDRSIPCTPHTKDRSTPCTPHTKDRSTSCTPHTKDRSTPCTPHTKDRSTSCT----P 363
Query: 486 HPCDALACNTDLTKRRPCS 542
H D T TK R S
Sbjct: 364 HTKDKSTSCTPHTKDRSTS 382
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 493 ATRSPAIRTLQRGAPVRTLHCVCSESRTPLQKKKKLIHAIPLNKISY 633
A ++ + L R ++H S +TP+Q K+ H+ L +SY
Sbjct: 260 AGKTEVAKVLLRSGAAESIHIENSNGKTPVQLAKESGHSETLELVSY 306
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/82 (26%), Positives = 30/82 (36%)
Frame = +3
Query: 315 PCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAKEDPPHPC 494
P P+ PC KQE C C+E+ K TK P + + P P
Sbjct: 134 PRPPVCPC---KQECNFC-----CIEEEKPTTTKKPTTKPTPAPHSSPSPTPPPPPIIPP 185
Query: 495 DALACNTDLTKRRPCSDPPLCV 560
N + RPC PP+ +
Sbjct: 186 CPPVINLLIPTARPCMPPPIII 207
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 315 PCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGE--ITKCLPGKFINVT 461
PC D K + EC L L+N +G + KC PG+F++ T
Sbjct: 640 PCPVGTYMDQYKHDFRECKPCGLGNMTLRNGTSSGGDCLPKCQPGRFLDTT 690
>SB_59058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 45 CRFHKMSDNNNSCTQNCKTQKNKCQPCLGPVTVQKLQDG-KPLMPEDRNHDSCACSDQKN 221
C++ ++ +NN S +++ QPC + +DG +P D + + +C D ++
Sbjct: 30 CKWRRVLENNYSRKHRADKREHPLQPCRIETLWRMGRDGFSTNVPRDMDKSNFSCFDGES 89
Query: 222 QEDRHR*TNSKMTKNVAKIDVKSCVKAEPPH 314
++ N + +DV ++ E P+
Sbjct: 90 SQNEFLRENWL----IIAVDVVEALQGELPY 116
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,876,374
Number of Sequences: 59808
Number of extensions: 548377
Number of successful extensions: 1773
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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