Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f09
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.28 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.28 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   4.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.0  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   8.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 345 TGVLKAVHQEHFFQLCARFFWMNVHLIMF 431
           T  L  ++  + F LC  F+W+ V + MF
Sbjct: 310 TDTLVVIYTFNLFYLCFCFYWLLVMVAMF 338


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 345 TGVLKAVHQEHFFQLCARFFWMNVHLIMF 431
           T  L  ++  + F LC  F+W+ V + MF
Sbjct: 266 TDTLVVIYTFNLFYLCFCFYWLLVMVAMF 294


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 359 SCPPRTFLPALCKIFLDECAP 421
           SCP  T L  +C+I +D+C P
Sbjct: 247 SCPSGT-LGYICEINVDDCRP 266


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 386 ALCKIFLDECAPD 424
           ALC I  D+C+P+
Sbjct: 101 ALCNINTDDCSPN 113


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 66  YNFLSPNHQIAVSIENT 16
           YNF  P HQ+  S  +T
Sbjct: 272 YNFRVPQHQVLQSPSST 288


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 307 FKSNELHITFITLPSQQPL 251
           F S+ +H   +T P  +PL
Sbjct: 229 FTSDRVHAALVTSPRARPL 247


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -3

Query: 290 AYHVHHPAQSAATPVMSLDPLLPSLQFSGMDHHSKLID 177
           A H HH A +AA    +   ++PS   +     +  +D
Sbjct: 7   AAHHHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVD 44


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -3

Query: 290 AYHVHHPAQSAATPVMSLDPLLPSLQFSGMDHHSKLID 177
           A H HH A +AA    +   ++PS   +     +  +D
Sbjct: 66  AAHHHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVD 103


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -3

Query: 290 AYHVHHPAQSAATPVMSLDPLLPSLQFSGMDHHSKLID 177
           A H HH A +AA    +   ++PS   +     +  +D
Sbjct: 7   AAHHHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVD 44


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -3

Query: 290 AYHVHHPAQSAATPVMSLDPLLPSLQFSGMDHHSKLID 177
           A H HH A +AA    +   ++PS   +     +  +D
Sbjct: 66  AAHHHHQAAAAAFGAAASGSMVPSFSSTASSALAAAVD 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,441
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)