Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f06
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   9.4  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   9.4  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   9.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 447 HDDVTMHLINELQVNLCTVETGPMINLAFIDGDFTTVIYSFI 572
           ++D+T   + E+Q+NL  ++ G  I +A  +G    +   F+
Sbjct: 106 NEDITYPTVLEVQLNLPILKDGVQIFIAPNNGAVKVLANEFL 147


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 447 HDDVTMHLINELQVNLCTVETGPMINLAFIDGDFTTVIYSFI 572
           ++D+T   + E+Q+NL  ++ G  I +A  +G    +   F+
Sbjct: 144 NEDITYPTVLEVQLNLPILKDGVQIFIAPNNGAVKVLANEFL 185


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 330  DEKLMYDCEYCYNRDIE 380
            D + +YDC  CY+ + E
Sbjct: 1061 DRERLYDCYVCYSPNDE 1077


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 240 ESKIKEDMSSLGCKSEKKISLAYHLYMYLIDEKLMYDCEYC 362
           ++K+K+     G   ++K       Y++    KL+ D EYC
Sbjct: 434 KNKLKKPRQGDGAAVKRKSREGSTTYLWEFLLKLLQDREYC 474


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 112 HFHHK*CVIYNFTIILSFV 56
           HFH    +IY+  +I+S V
Sbjct: 55  HFHIGLAIIYSMLLIMSLV 73


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 50  YNNKRKNNCK 79
           YNN   NNCK
Sbjct: 343 YNNNYNNNCK 352


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 112 HFHHK*CVIYNFTIILSFV 56
           HFH    +IY+  +I+S V
Sbjct: 55  HFHIGLAIIYSMLLIMSLV 73


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/29 (20%), Positives = 15/29 (51%)
 Frame = +3

Query: 582 VARTNSEKQNKREEKRSFINNELKKKRNE 668
           +  TN++  N ++  +   NN+    +N+
Sbjct: 423 IQNTNNQNDNNQKNNKKNANNQKNNNQND 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,530
Number of Sequences: 438
Number of extensions: 4446
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)