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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f04
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    26   0.23 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    26   0.30 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.69 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   0.91 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.5  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 479 TREHSPVPIQSRGAASPTPQEKLSLVTLSKFNTLESTV 592
           T   SP    ++  +SPTP +KL+  T S  N  +  +
Sbjct: 34  TPPQSPNQQYTKDCSSPTPSDKLNTSTTSSVNVNDQNI 71


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 318 HKPLRSANMWSILKTKIRPHH 380
           H  +   N W  L+TK  PHH
Sbjct: 87  HLMIHRPNWWHELETKFNPHH 107


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 449 KKSLSPLRSPTREHSPVPIQSRGAASPTPQEKLSLVTLSKFNTLESTVEDL 601
           KKS     SP+   S +P Q    ++PT   +  + + S   T  S   DL
Sbjct: 68  KKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGSDL 118


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 416 EPDTILVVERIKKSLSPLRSPTREHSPV 499
           +PD  L +++  + LSP      +HSPV
Sbjct: 186 DPDRPLPLDQKARDLSPRNGSPTDHSPV 213


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 252 SCCARQCRTVWSILKSTTPTSGVPI 178
           +C A   RT+WS  K   P   +PI
Sbjct: 224 ACYAVIVRTIWSKSKLLIPVGHIPI 248


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 603 FKSSTVDSSVLNLLSVTSDSF 541
           F +     SVLNLLSV   SF
Sbjct: 475 FVAGLATLSVLNLLSVIKSSF 495


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 68  NLIQFSDINFFNTNLSNKMTAEDTSVLLN 154
           NL+  +D+N    +    M+ E+ S ++N
Sbjct: 304 NLLHSNDLNMHQQHHQQNMSHEELSAMVN 332


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 116 NKMTAEDTSVLLNIGEMIDLAIGTPEVGVVDFNMLQTV 229
           NK+         N+ E+ DL +    +  +DFN+   V
Sbjct: 150 NKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQV 187


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 312 ITHKPLRSANMW 347
           ++H P+ SAN W
Sbjct: 186 LSHAPIDSANQW 197


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 316 VISAYWQSDAAFQLYVFTQDT*LLCQAVQDRLEHIEV 206
           V+   W S + + L   ++    LCQA  D   + EV
Sbjct: 193 VLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEV 229


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 316 VISAYWQSDAAFQLYVFTQDT*LLCQAVQDRLEHIEV 206
           V+   W S + + L   ++    LCQA  D   + EV
Sbjct: 189 VLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEV 225


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 312 ITHKPLRSANMW 347
           ++H P+ SAN W
Sbjct: 177 LSHAPIDSANQW 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,512
Number of Sequences: 336
Number of extensions: 2915
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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