Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f01
         (665 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4XH60 Cluster: Molybdopterin oxidoreductase; n=2; Synt...    36   1.2  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    34   2.7  
UniRef50_UPI00006CE92D Cluster: hypothetical protein TTHERM_0056...    33   4.7  
UniRef50_A6LMF7 Cluster: Aminotransferase, class I and II; n=1; ...    33   4.7  

>UniRef50_A4XH60 Cluster: Molybdopterin oxidoreductase; n=2;
           Syntrophomonadaceae|Rep: Molybdopterin oxidoreductase -
           Caldicellulosiruptor saccharolyticus (strain ATCC 43494
           / DSM 8903)
          Length = 1178

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -1

Query: 224 SFKQLSTS--HRFVLITASRCFECGCCQYIR-YLLEVTTRFKIDHVRLFLYNHR 72
           +F++++++   +  +  ASRC ECGC  Y    L +   ++ +D  RL  Y H+
Sbjct: 543 NFREITSTMTEKEAIAEASRCLECGCMDYFECQLYKYVNQYDVDPQRLSGYKHK 596


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 452 FLLLGWVDELTAHLVL 499
           FLLL WVDELTAHLVL
Sbjct: 154 FLLLRWVDELTAHLVL 169


>UniRef50_UPI00006CE92D Cluster: hypothetical protein
           TTHERM_00561140; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00561140 - Tetrahymena
           thermophila SB210
          Length = 276

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -1

Query: 305 KLLQILISGENWGCLTTIPVTVFIQTTSFKQLSTSHRFVLITASRCFECGCCQYIRYLLE 126
           +++ I + GEN   +     T  IQT  +  +    R+VL   S CF+C C + +  L  
Sbjct: 155 QIVGISLGGENMEAMAHYK-TFIIQTYVYSAIPKPSRYVL---SNCFQCNCIKDLPNLEI 210

Query: 125 VTTRFKID-HVRLFLYNH 75
            T  +KI   ++ F Y +
Sbjct: 211 FTAEYKITIRIKEFTYTN 228


>UniRef50_A6LMF7 Cluster: Aminotransferase, class I and II; n=1;
           Thermosipho melanesiensis BI429|Rep: Aminotransferase,
           class I and II - Thermosipho melanesiensis BI429
          Length = 372

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = -3

Query: 276 KLGLSHDYTGYCIYTNYKF*AIINEPPFRPYHRVSLLRMWLLPIHSIFIGSNDALQ 109
           K  ++H   GY       + AIIN   FR YH   + R W++PI  +  G + A+Q
Sbjct: 43  KSRVNHGVYGYTFRPKSYYEAIINW--FRNYHAFDIKREWIVPIPGVVPGISFAIQ 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,319,515
Number of Sequences: 1657284
Number of extensions: 13296759
Number of successful extensions: 26266
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26264
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)