Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f01
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.1  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 99  LTSPLSVSTSPPGKPATSTASQ 120


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 564 LRSPYITTVAPPFKPKRITASR 629
           L SP   + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 495 TRWAVSSSTHPSNKKKTQCF 436
           TR + SSSTH S+++ +  F
Sbjct: 384 TRKSTSSSTHTSSQQTSDSF 403


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 311 FNKLLQILISGENWGCLTTIPVTVFIQTTSFK 216
           F+++L +++S + W   T + V +F    S+K
Sbjct: 150 FSEIL-VIVSEQEWSFSTGLLVMIFNSALSYK 180


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 311 FNKLLQILISGENWGCLTTIPVTVFIQTTSFK 216
           F+++L +++S + W   T + V +F    S+K
Sbjct: 168 FSEIL-VIVSEQEWSFSTGLLVMIFNSALSYK 198


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 269 PSFHQKSRFEVIY*IIYRTSDAFDVSR 349
           PSFHQ   F VI+   +       VSR
Sbjct: 27  PSFHQTFSFVVIFGQFFGIMPLHGVSR 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,810
Number of Sequences: 336
Number of extensions: 3525
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)