Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2f01
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069198-1|AAL39343.1|  520|Drosophila melanogaster GH25591p pro...    29   5.7  
AE014134-184|AAN10492.1|  967|Drosophila melanogaster CG4226-PB,...    29   5.7  
AE014134-183|AAF51433.2|  967|Drosophila melanogaster CG4226-PA,...    29   5.7  

>AY069198-1|AAL39343.1|  520|Drosophila melanogaster GH25591p
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 115 RVVTSNKYRMYWQQPHSKQRDAVIRTKRWLVDNCLKLVVCINTVTG--IVVRQPQ 273
           + + +   +M W+ PH   RD  +   +W + N   L V      G  I+ R PQ
Sbjct: 150 KTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWLTVASIMTAGCDILPRSPQ 204


>AE014134-184|AAN10492.1|  967|Drosophila melanogaster CG4226-PB,
           isoform B protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 115 RVVTSNKYRMYWQQPHSKQRDAVIRTKRWLVDNCLKLVVCINTVTG--IVVRQPQ 273
           + + +   +M W+ PH   RD  +   +W + N   L V      G  I+ R PQ
Sbjct: 597 KTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWLTVASIMTAGCDILPRSPQ 651


>AE014134-183|AAF51433.2|  967|Drosophila melanogaster CG4226-PA,
           isoform A protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 115 RVVTSNKYRMYWQQPHSKQRDAVIRTKRWLVDNCLKLVVCINTVTG--IVVRQPQ 273
           + + +   +M W+ PH   RD  +   +W + N   L V      G  I+ R PQ
Sbjct: 597 KTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWLTVASIMTAGCDILPRSPQ 651


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,410,302
Number of Sequences: 53049
Number of extensions: 633412
Number of successful extensions: 1028
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)