Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2e22
(409 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24451| Best HMM Match : BRF1 (HMM E-Value=7.4) 29 1.1
SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27) 29 1.9
SB_56986| Best HMM Match : Peptidase_M50 (HMM E-Value=3.8) 28 3.4
SB_55578| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 3.4
SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 27 5.9
SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_16226| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_16225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
>SB_24451| Best HMM Match : BRF1 (HMM E-Value=7.4)
Length = 372
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 KKMLKTFTPSRPVLELANR-SLRNVRTTQKQTLHKKYTNNNKYINSSM*KK 407
KK + F SRP ++ +R + VRT + L K KY SSM KK
Sbjct: 48 KKAMSEFMISRPKVKRGHRRKMVEVRTQDGKALLVKRGQEGKYFKSSMKKK 98
>SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27)
Length = 492
Score = 28.7 bits (61), Expect = 1.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 214 KGSFYPPFTYGAD*EEHDHSHRNGKQIQPNGHN 116
K +F PP+ YG + +++ + N NG+N
Sbjct: 377 KDNFQPPYQYGLNNNVYNNGYNNNNGYNSNGYN 409
>SB_56986| Best HMM Match : Peptidase_M50 (HMM E-Value=3.8)
Length = 216
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 409 FFFYIEEFMYLLLFVYFLCSVCFCVV 332
+F Y+ + YL+L +YF CS V
Sbjct: 36 WFIYLTNWSYLILTLYFACSTALTAV 61
>SB_55578| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 333
Score = 27.9 bits (59), Expect = 3.4
Identities = 7/34 (20%), Positives = 22/34 (64%)
Frame = +2
Query: 104 TFYYVMSIWLYLFPIAVAVVMFLLIGTICERRIE 205
+F Y +S+ + FP+ + ++M+++I + +++
Sbjct: 168 SFLYFVSVVCFFFPLTIVIIMYIVIFVVVRIQVK 201
>SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 363 IFYVAFVFVLFVRCGVIGWQV 301
IF + +F F+ CG++GW V
Sbjct: 578 IFTLLLLFTFFMTCGLVGWGV 598
>SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 758
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 289 RDGVNVFNIFFIPLYLCLTKFHDMMKGSFYPPFTYGAD*EEHDH 158
++ ++ IFF L+ +T F D + FY P +Y A E HD+
Sbjct: 188 KEVLDAVRIFFPNLFKQMTSF-DRILTRFYEPASYKAMCESHDN 230
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -2
Query: 408 FFFTLKNLCIYYYSCIFYVAF---VFVLFVRCG 319
FFF + +LC + F AF +FVL RCG
Sbjct: 541 FFFPINSLCNPFLYAFFTKAFKRELFVLLSRCG 573
>SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 289 RDGVNVFNIFFIPLYLCLTKFHDMMKGSFYPPFTYGAD*EEHDH 158
++ ++ IFF L+ +T F D + FY P +Y A E HD+
Sbjct: 241 KEVLDAVRIFFPNLFKQVTSF-DRILTRFYEPASYKAMCESHDN 283
>SB_16226| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 92 NFELTFYYVMSIWLYLFPIAVAVVMFLLIGTI 187
NF+ +Y V+S+ L+ P+ + VM+ + T+
Sbjct: 184 NFDPIYYTVLSVVLFFLPLFIVFVMYGHVFTV 215
>SB_16225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 92 NFELTFYYVMSIWLYLFPIAVAVVMFLLIGTI 187
NF+ +Y V+S+ L+ P+ + VM+ + T+
Sbjct: 184 NFDPIYYTVVSVVLFFLPLYIVFVMYGRVFTV 215
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 204 KLPFIISWNFVKHKYRGMKKMLKTFTPSRP-VLELANRSLRNVRT-TQKQTLHKKYTNNN 377
K I+ WN +K KY K K P E+ ++ L R Q++ L KK N
Sbjct: 1054 KREVIMEWNAMKRKYENKKVKTKRLRKKGPWTGEILDKILAEQRVYDQQKRLRKKGEKAN 1113
Query: 378 KY 383
++
Sbjct: 1114 RW 1115
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 173 LIGTICERRIEATFHHIMELR 235
+I T+C R E T+H ++E+R
Sbjct: 1617 VIRTLCPERGEQTYHEVLEIR 1637
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,127,597
Number of Sequences: 59808
Number of extensions: 262464
Number of successful extensions: 639
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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