Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2e18
(724 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 256 2e-69
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 181 1e-46
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 118 8e-28
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 115 6e-27
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 113 3e-26
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 101 1e-22
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 99 7e-22
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 98 1e-21
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 93 3e-20
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 80 3e-16
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 70 3e-13
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 69 7e-13
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 69 9e-13
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 38 0.001
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 33 0.041
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 31 0.17
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 27 2.7
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 26 4.7
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 26 6.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 6.3
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 25 8.3
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 25 8.3
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 256 bits (627), Expect = 2e-69
Identities = 113/165 (68%), Positives = 136/165 (82%)
Frame = +2
Query: 62 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 241
M S LL+KQL E+ KNP +GFS GL+DD I++WEV+IIGP DTLYEGGFF A L+
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 242 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 421
FP++YPL PP+MKF TEIWHPN+ NG+VCISILH PGDDK+GYE A ERWLPVH+ ETI
Sbjct: 61 FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETI 120
Query: 422 LISVISMLADPNDESPANVDAAKEWRESYSEFKRKVAQCVRKSQE 556
LISVISML+ PNDESPAN+DAAKE+RE+ EFK++V + VR+S E
Sbjct: 121 LISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIE 165
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 181 bits (440), Expect = 1e-46
Identities = 84/163 (51%), Positives = 111/163 (68%)
Frame = +2
Query: 62 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 241
MS+ + L K+ EL +N +G +AG +++D + W+ LI GP T +EGG + A L
Sbjct: 1 MSKAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLK 60
Query: 242 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 421
FP +YPL PP +KF E +HPN+ K+G VCISILH PGDD YE +SERW PV +VE I
Sbjct: 61 FPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKI 120
Query: 422 LISVISMLADPNDESPANVDAAKEWRESYSEFKRKVAQCVRKS 550
L+SV+SMLA+PNDES AN+DA K WRE E+ R V + RK+
Sbjct: 121 LLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKT 163
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 118 bits (284), Expect = 8e-28
Identities = 61/156 (39%), Positives = 91/156 (58%)
Frame = +2
Query: 89 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 268
L + + ++P G SA + DN + W +IIGP DT +E G FK L+F ++YP +P
Sbjct: 9 LMRDFKRMQQDPPAGVSASPVSDN-VMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKP 67
Query: 269 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 448
P +KFV+ ++HPN+ NG++C+ IL RW P + V IL S+ S+L
Sbjct: 68 PLVKFVSTMFHPNVYANGELCLDIL-------------QNRWSPTYDVAAILTSIQSLLN 114
Query: 449 DPNDESPANVDAAKEWRESYSEFKRKVAQCVRKSQE 556
DPN+ SPAN +AA+ RE+ E+ R+V + V S E
Sbjct: 115 DPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSWE 150
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 115 bits (277), Expect = 6e-27
Identities = 52/153 (33%), Positives = 87/153 (56%)
Frame = +2
Query: 89 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 268
+ ++LA+L K+P SAG + D D++ W+ I+GP D+ Y GG F ++FP +YP +P
Sbjct: 6 INRELADLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKP 64
Query: 269 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 448
P++ F T I+HPNI+ NG +C+ IL ++W P T+ +L+S+ S+L
Sbjct: 65 PKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSLLT 111
Query: 449 DPNDESPANVDAAKEWRESYSEFKRKVAQCVRK 547
DPN + P + A ++ S ++ + RK
Sbjct: 112 DPNPDDPLVPEIAHVYKTDRSRYELSAREWTRK 144
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 113 bits (271), Expect = 3e-26
Identities = 56/156 (35%), Positives = 87/156 (55%)
Frame = +2
Query: 89 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 268
L+ +L L + G SA D+++ W I GP DT YEG FK ++FP YP P
Sbjct: 33 LRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSP 92
Query: 269 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 448
P + F + +WHPN+D +G++C+ IL ++W V+ V+TIL+S+ S+L
Sbjct: 93 PTIIFTSPMWHPNVDMSGNICLDIL-------------KDKWSAVYNVQTILLSLQSLLG 139
Query: 449 DPNDESPANVDAAKEWRESYSEFKRKVAQCVRKSQE 556
+PN+ SP N AA+ W + E+KR + Q ++ E
Sbjct: 140 EPNNASPLNAQAAELWSKDPIEYKRLLMQRYKEIDE 175
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 101 bits (242), Expect = 1e-22
Identities = 47/153 (30%), Positives = 83/153 (54%)
Frame = +2
Query: 65 SEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNF 244
+ P SS L K+ ++L ++P+ L+DDN ++ W +GP D++Y GG F L F
Sbjct: 4 ASPSSSRRLTKEYSDLREHPIPDIRVNLVDDN-LFHWACTALGPSDSVYAGGKFHFSLKF 62
Query: 245 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 424
P +YP +PP ++F T I+HPN D G+VC++IL + + + P + ++L
Sbjct: 63 PLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQ------------QVFKPSIKLRSVL 110
Query: 425 ISVISMLADPNDESPANVDAAKEWRESYSEFKR 523
++ +L +PN + P A+++R F +
Sbjct: 111 EQILQLLREPNPDDPLVASIAEQYRNDRPSFDK 143
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 98.7 bits (235), Expect = 7e-22
Identities = 47/130 (36%), Positives = 76/130 (58%)
Frame = +2
Query: 161 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 340
D+ W+V I G P T +EGG +K + FP+EYP RPP+ +F ++HPN+ +G VC+SI
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 341 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRESYSEFK 520
L+E E W P T++ IL+ + +L DPN SPA +A +++ E++
Sbjct: 97 LNE-----------EEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYE 145
Query: 521 RKVAQCVRKS 550
++V R++
Sbjct: 146 KRVRAQAREN 155
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 97.9 bits (233), Expect = 1e-21
Identities = 47/137 (34%), Positives = 78/137 (56%)
Frame = +2
Query: 95 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 274
K++ L ++P G A +DN Y +++ + GP + YEGG F L P EYP+ PP
Sbjct: 9 KEIETLTRDPPPGIVAAPTEDNLRY-FKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPN 67
Query: 275 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 454
++F+T+I+HPN+DK G +C+S L + W P + T+L+S+ +++ P
Sbjct: 68 VRFLTKIYHPNVDKLGRICLSTL-------------KKDWSPALQIRTVLLSIQALMGAP 114
Query: 455 NDESPANVDAAKEWRES 505
N + P + D AK W+E+
Sbjct: 115 NPDDPLDNDVAKIWKEN 131
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 93.5 bits (222), Expect = 3e-20
Identities = 48/146 (32%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Frame = +2
Query: 89 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 268
+ K+LA++ ++ G I+D DI + + GP T YEGG+F + P +YP RP
Sbjct: 9 IAKELADVQQDKQAGIQVWTIND-DISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRP 67
Query: 269 PRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 445
P+M F T+I+HPN+ + G +C+ IL ++W PV+T+++ LIS+ S+L
Sbjct: 68 PKMNFDTKIYHPNVSSQTGAICLDIL-------------KDQWSPVYTMKSALISLQSLL 114
Query: 446 ADPNDESPANVDAAKEWRESYSEFKR 523
P +P + A+ + ++Y +F R
Sbjct: 115 CTPEPSNPQDAQVAQVYLQNYQQFVR 140
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 80.2 bits (189), Expect = 3e-16
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +2
Query: 89 LKKQLAELNKNPVEGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLR 265
L K+ A + G + D D++ W+ +I GP +T YEGG + ++ + YP+
Sbjct: 8 LHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPIS 67
Query: 266 PPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISM 442
PP + F T+I HPNI NG+VC+ IL W P ++++ +++IS+
Sbjct: 68 PPSVYFQTKIVHPNISWTNGEVCMDIL-------------KTHWSPAWSLQSACLAIISL 114
Query: 443 LADPNDESPANVDAAKEWRESYSEFKRKVAQC 538
L++ + SP NVDAAK R + +C
Sbjct: 115 LSNYDASSPLNVDAAKLLRTGDKTAYNSLVRC 146
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 70.1 bits (164), Expect = 3e-13
Identities = 38/121 (31%), Positives = 61/121 (50%)
Frame = +2
Query: 182 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDD 361
L I P + Y+GG FK + YP PP++K + +I+HPNID G+VC++IL +
Sbjct: 56 LEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQD--- 112
Query: 362 KWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRESYSEFKRKVAQCV 541
W PV + +IL+ + + PN E P N +AA + + F +V +
Sbjct: 113 ----------WNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAM 162
Query: 542 R 544
+
Sbjct: 163 K 163
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 68.9 bits (161), Expect = 7e-13
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Frame = +2
Query: 134 FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID 313
+ L++DN + ++ V GP +T Y GG +K H+ P EYP + P + FV I+HPNID
Sbjct: 20 YEVTLVNDN-MQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNID 78
Query: 314 K-NGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL-ISVISMLADPNDESPANVDAA 487
+ +G VC+ ++ ++ W P+ + I + + +L PN P N +AA
Sbjct: 79 ELSGSVCLDVI-------------NQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAA 125
Query: 488 ----KEWRESYSEFKRKVAQCVRKSQED 559
+E Y++ + +A+ K D
Sbjct: 126 ALLLREPNTYYAKVRDYIARYANKEDAD 153
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 68.5 bits (160), Expect = 9e-13
Identities = 44/143 (30%), Positives = 72/143 (50%)
Frame = +2
Query: 86 LLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLR 265
L+K+ LA L KNPVE A +N I +W +I GPPDT YEGG + L FP +YP +
Sbjct: 10 LMKEYLA-LQKNPVELVDAKPATEN-ILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFK 67
Query: 266 PPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 445
PP ++ +T N +C+S + + W P V TIL+ ++S +
Sbjct: 68 PPAIRMITP--SGRFQTNTRLCLSF----------SDFHPKSWNPSWMVSTILVGLVSFM 115
Query: 446 ADPNDESPANVDAAKEWRESYSE 514
++ + + ++ R +Y++
Sbjct: 116 TS-DEITTGGIVTSESTRRTYAK 137
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 152 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID 313
DD + W I+GP +++E + ++ YP PP + FV+ I P +D
Sbjct: 34 DDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVD 87
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 33.1 bits (72), Expect = 0.041
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 480 STLAGLSSFGSASIEMTLISIVSTVCTGNH 391
STL SF +AS+ TLI+I ++ CTGN+
Sbjct: 56 STLPYTHSFSNASVYTTLITITNSQCTGNY 85
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 31.1 bits (67), Expect = 0.17
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 626 TTSHQSLSQSKQI-MKKGTVIRNNPLGSFSHTVLLSF*TPNRILSTL 489
T S + +Q K+ +KKG V+++ LG HTV+ +F + N LS +
Sbjct: 404 TMSTVNSNQIKRFFLKKGDVVQSTRLGKIKHTVVKTFRSTNEQLSLI 450
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 683 LNQFEYSLWARRGRPL---SVLTTSHQSLSQSKQIMKKGTVIRNNPLG 549
+ ++ SL +G L ++ T S +SKQ +K+ T ++N+P G
Sbjct: 478 IQKYASSLTGAKGGQLKRQTIFTQGPNSTKESKQAVKEETSVKNSPKG 525
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 377 KASERWLPVHTVETILISVISMLADPNDESPANVDA 484
K ++ W+P+H L + ML PN +P +DA
Sbjct: 196 KLTDEWVPLHGGSGELR--VQMLYKPNQSTPLTIDA 229
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 89 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYE 214
L+++ + KN GF +G+++D+ I ++ +G P Y+
Sbjct: 187 LERKPVGMAKNLRGGFGSGVLNDDGIEDQDIYDLGAPKMRYD 228
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 65 SEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYK 172
SEPQ L AEL N ++ F +DD ++Y+
Sbjct: 1780 SEPQEQYLSSSNYAELFSNQIQLF----VDDTNVYR 1811
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 413 ETILISVISMLADPNDESPANVDAAKEWRESYSEFKRK 526
E I +S +S ++D +SPA + + +RE S KRK
Sbjct: 133 ENIPLSQLSAVSDGKADSPATKKSRRSYRE--SSLKRK 168
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 78 DCGSDINYNCEIYPED 31
DCGS+ Y CEI E+
Sbjct: 65 DCGSNCGYECEITAEN 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,153,754
Number of Sequences: 5004
Number of extensions: 68222
Number of successful extensions: 226
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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