Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e17
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   9.9  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   9.9  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   9.9  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 374 PERTIDTPQFPAPYLSPLYIAPVGVTTS 291
           P+  I     PAP  SPL   P   TTS
Sbjct: 82  PDPEIPVAPEPAPLASPLVQEPGSSTTS 109


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 176 NSFMLSLDGKRVRLSPNCSLTSSAS 102
           N+FML +   R ++   C+L  SA+
Sbjct: 484 NAFMLYMKEMRAKVVAECTLKESAA 508


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 176 NSFMLSLDGKRVRLSPNCSLTSSAS 102
           N+FML +   R ++   C+L  SA+
Sbjct: 376 NAFMLYMKEMRAKVVAECTLKESAA 400


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 558  LFNCISCRHYWVHEQHLSSCNVFWKLRIYN 469
            LF C+ C H    ++  S  N+   L + N
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLN 1145


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 558  LFNCISCRHYWVHEQHLSSCNVFWKLRIYN 469
            LF C+ C H    ++  S  N+   L + N
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLN 1145


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 558  LFNCISCRHYWVHEQHLSSCNVFWKLRIYN 469
            LF C+ C H    ++  S  N+   L + N
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLN 1145


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 558  LFNCISCRHYWVHEQHLSSCNVFWKLRIYN 469
            LF C+ C H    ++  S  N+   L + N
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLN 1145


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +1

Query: 130 GDSLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKL 276
           G +LT+ PS+  + + +T+   +     DF   +D     +I E + +L
Sbjct: 173 GRTLTVTPSHLLVLDDRTMKYAQKLQPGDFLLVSDNAKNALISEKIVRL 221


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 457 VCQYHFLLRFY 425
           +C YHF L  Y
Sbjct: 120 ICYYHFTLELY 130


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 457 VCQYHFLLRFY 425
           +C YHF L  Y
Sbjct: 120 ICYYHFTLELY 130


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 344 PAPYLSPLYIAPVGVTTS 291
           P PYLSPL+ +    T S
Sbjct: 110 PHPYLSPLFHSAAPRTAS 127


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +1

Query: 112 DVKEQFGDSLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLP 279
           D+ ++    L +L  +  + E+ T+L D +   +       + +   I+ESL   P
Sbjct: 22  DLVQKIAQKLQVLFQDQIVDEMVTVLGDLHRKPTYNNLQEMKYLERAIKESLRLYP 77


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 58  FWIKMEIIDQDIRQWDADDVKEQFGDS 138
           F++ M  + QDI+     ++ + FGDS
Sbjct: 7   FFLSMMGVHQDIQDKVVQELYDIFGDS 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,034
Number of Sequences: 336
Number of extensions: 3953
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)