Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e16
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.0  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 139 MLSFSSNFLNILMYL*HS*RSLKN 68
           ++SF+S+ L IL+ L +S R +KN
Sbjct: 292 LMSFASDLLFILIQLFNSLRQMKN 315


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 139 MLSFSSNFLNILMYL*HS*RSLKN 68
           ++SF+S+ L IL+ L +S R +KN
Sbjct: 292 LMSFASDLLFILIQLFNSLRQMKN 315


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 139 MLSFSSNFLNILMYL*HS*RSLKN 68
           ++SF+S+ L IL+ L +S R +KN
Sbjct: 292 LMSFASDLLFILIQLFNSLRQMKN 315


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 715 ASYKLNEHLDRSRVVF 668
           AS  LNEHL+  R VF
Sbjct: 464 ASETLNEHLEHLRQVF 479


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +3

Query: 237  LPKKDTFRIVKCHDHLEIMVNSA 305
            +PK+DTF+I+  + +L + V +A
Sbjct: 1595 IPKEDTFQIILANLNLVVPVVAA 1617


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 467 QREDVSERQGSSCRHNGRGERTCSSYRYHYSLN 565
           QR+  ++ +    R NGR +  C++Y   +  N
Sbjct: 484 QRQQCNQNKCPVKRGNGRCDEECNTYACEFDGN 516


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 337 VPGCQP*NYCTNIRSSFRCSKLTKALF 417
           +PGC   + C+NI++  + ++L +  F
Sbjct: 375 LPGCHMVDSCSNIQTGEQFARLLRHNF 401


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 337 VPGCQP*NYCTNIRSSFRCSKLTKALF 417
           +PGC   + C+NI++  + ++L +  F
Sbjct: 382 LPGCHMVDSCSNIQTGEQFARLLRHNF 408


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,179
Number of Sequences: 336
Number of extensions: 3669
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)