Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e15
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   1.8  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   1.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.4  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 565 RRGDTKCDKTRRTVCSNVHRSMEPRVFIEAISRSS 669
           RR  T+C++ +RT+ S    S+E     + I  S+
Sbjct: 89  RRLRTQCERAKRTLSSATQASIEIDSLFDGIDYST 123


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 565 RRGDTKCDKTRRTVCSNVHRSMEPRVFIEAISRSS 669
           RR  T+C++ +RT+ S    S+E     + I  S+
Sbjct: 89  RRLRTQCERAKRTLSSATQASIEIDSLFDGIDYST 123


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 457 LSRLQATK-KNYNLRIMLSIVSA 522
           L R+ A K KN NL++MLS+  A
Sbjct: 82  LKRVSALKEKNPNLKVMLSVGGA 104


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 240 FAAPPLALVLQYDD 199
           + APP  L+ QYDD
Sbjct: 533 YMAPPAPLISQYDD 546


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 196 FRNLVRSFFIPRNEKSQFSPPLLTS 122
           F N +   F  R EKS+F P L+++
Sbjct: 215 FVNYIDDLFFFRFEKSKFEPFLISN 239


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 319 GTRPRGRLPLRWTGSVKECTRKVARY 396
           G    GRLP  W G   E   ++ R+
Sbjct: 213 GFDTEGRLPPVWQGGESEALARLERH 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,308
Number of Sequences: 336
Number of extensions: 3517
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)