Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e15
         (704 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)                 40   0.003
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)                     30   1.6  
SB_33465| Best HMM Match : zf-MYM (HMM E-Value=6.6)                    29   2.8  
SB_13610| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_18623| Best HMM Match : HC2 (HMM E-Value=0.49)                      29   3.7  
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_51129| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.5  
SB_745| Best HMM Match : Aa_trans (HMM E-Value=0.047)                  28   8.5  

>SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)
          Length = 1130

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 701 SRFVLNEFLGYDDLLMASIKTL 636
           SRF+L+EFLGYDD+LM+SIK L
Sbjct: 405 SRFLLDEFLGYDDVLMSSIKRL 426


>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 870

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 575 TQNATRRVGPCAATSIGQWSRG 640
           T++ TR   PC A  +GQW RG
Sbjct: 388 TRSETRLCRPCGANRVGQWMRG 409


>SB_33465| Best HMM Match : zf-MYM (HMM E-Value=6.6)
          Length = 127

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 644 KTLGSIDRWTLLHTVRRVLSHFVSPRLF*NP 552
           K+   +  W +LH+V ++L H VS  LF  P
Sbjct: 43  KSFSKMQVWDILHSVTQLLEHVVSGMLFGTP 73


>SB_13610| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 272

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 511 IVSAYLFLFINVLKGF*NRRGDTKCDKTRRTV 606
           +V+  LF     L G   +RG+ KCDK +RT+
Sbjct: 12  LVAVALFCESEALNGVGCKRGNRKCDKGKRTI 43


>SB_18623| Best HMM Match : HC2 (HMM E-Value=0.49)
          Length = 384

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 280 ERSKWGEAQGTIEGTRPRGRLPL-RWTGSVKECTRKVARYARN 405
           ERSKW   +GT++  R +G  P  R  G+ ++ T K  R   N
Sbjct: 152 ERSKWNAQKGTLKRERSKGNAPRERSKGNAQKGTLKRERSKGN 194


>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 392

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 359 PVHRNGNLPRGLVPSIVPCASPH---FDLSTISQIEIICFFPYLPRRHLP 219
           P  R  + P G +PSI   +S H     L  +S  EI   FP  P+ HLP
Sbjct: 300 PEWRVCSSPSGPLPSISSFSSEHEGLHHLDLVSHPEIPSGFPLKPKDHLP 349


>SB_51129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 150 DFSFLGIKNERTKFRNNHRIEALRQVAARQIRKETNYLYLANCRE 284
           + SF  I+  +TK R + RI    Q  A ++ K T Y      R+
Sbjct: 3   ELSFTDIQKAKTKLRTSSRIPIRGQKTALKLNKPTGYAGYVRARK 47


>SB_745| Best HMM Match : Aa_trans (HMM E-Value=0.047)
          Length = 261

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = -1

Query: 455 VVVVISSVSGALHKMSPFLAYLATFLVHSLTEPVHRNGNLPRGLVPSIVPCASPHFDLST 276
           VV+VI+ +  A  K S     +A  +  + T+ V  N NLP G +  +V  +S  F +ST
Sbjct: 176 VVIVITYIIEATIKCS--FGLVAVLVYSTDTQDVVIN-NLPDGAIRKVVCVSSALFIIST 232

Query: 275 ISQIEIIC 252
           ++ +  +C
Sbjct: 233 VTMMLKMC 240


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,692,579
Number of Sequences: 59808
Number of extensions: 452187
Number of successful extensions: 1077
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)