Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e15
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ005958-1|AAY27747.1|  620|Homo sapiens membralin protein protein.    39   0.015
BC008957-1|AAH08957.1|  408|Homo sapiens chromosome 19 open read...    39   0.015
AC004528-3|AAC12681.1|  529|Homo sapiens R32184_3 protein.             39   0.015
AK074558-1|BAC11059.1|  149|Homo sapiens protein ( Homo sapiens ...    31   4.0  

>DQ005958-1|AAY27747.1|  620|Homo sapiens membralin protein protein.
          Length = 620

 Score = 39.1 bits (87), Expect = 0.015
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = -1

Query: 704 FSRFVLNEFLGYDDLLMASIKTL 636
           FSR +L+EFLGYDD+LM+S+K L
Sbjct: 251 FSRLLLDEFLGYDDILMSSVKGL 273


>BC008957-1|AAH08957.1|  408|Homo sapiens chromosome 19 open reading
           frame 6 protein.
          Length = 408

 Score = 39.1 bits (87), Expect = 0.015
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = -1

Query: 704 FSRFVLNEFLGYDDLLMASIKTL 636
           FSR +L+EFLGYDD+LM+S+K L
Sbjct: 251 FSRLLLDEFLGYDDILMSSVKGL 273


>AC004528-3|AAC12681.1|  529|Homo sapiens R32184_3 protein.
          Length = 529

 Score = 39.1 bits (87), Expect = 0.015
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = -1

Query: 704 FSRFVLNEFLGYDDLLMASIKTL 636
           FSR +L+EFLGYDD+LM+S+K L
Sbjct: 251 FSRLLLDEFLGYDDILMSSVKGL 273


>AK074558-1|BAC11059.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90077 fis, clone HEMBA1004454. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
 Frame = -1

Query: 452 VVVISSVSGALHKMSPFLAYLA-TFLVH--SLTEPVHRNGNLPRGLV------PSIVPCA 300
           VV++  +SG+  +      +L+  FL H  +L  P       PR L+      PS  P  
Sbjct: 62  VVLVHPLSGSCQRYFSCPVFLSLAFLSHPKNLPRPYGSLPFFPRQLLIWAVCTPSFAPPT 121

Query: 299 SPHFDLSTISQIEIICFFPYLPRRH 225
            PH   S +SQ+  + FF     RH
Sbjct: 122 MPHVAESCLSQLSTLAFFSLCSTRH 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,146,701
Number of Sequences: 237096
Number of extensions: 2059879
Number of successful extensions: 7805
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7805
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)