Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e13
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-12|CAB70221.2|  415|Caenorhabditis elegans Hypothetical p...    27   5.1  
Z75540-7|CAB70215.2|  415|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    26   8.9  

>Z79600-12|CAB70221.2|  415|Caenorhabditis elegans Hypothetical
           protein F37D6.6 protein.
          Length = 415

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 184 LSCSNWRVSSDHNRTGKRFFKRRALVT 264
           + C  W V S+  R  +R ++RR LVT
Sbjct: 1   MDCGMWCVFSERRRHVERLWRRRLLVT 27


>Z75540-7|CAB70215.2|  415|Caenorhabditis elegans Hypothetical
           protein F37D6.6 protein.
          Length = 415

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 184 LSCSNWRVSSDHNRTGKRFFKRRALVT 264
           + C  W V S+  R  +R ++RR LVT
Sbjct: 1   MDCGMWCVFSERRRHVERLWRRRLLVT 27


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical protein
            C27B7.7 protein.
          Length = 1471

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 215  IIIEQENASSNEEHSL 262
            I I++EN S NEEHS+
Sbjct: 1286 IYIQKENESENEEHSI 1301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,790,231
Number of Sequences: 27780
Number of extensions: 81815
Number of successful extensions: 114
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)