Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e12
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl...    29   2.4  
Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p...    28   5.4  
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p...    28   5.4  
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related...    28   5.4  
Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z81459-1|CAB03827.3|  731|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z79604-6|CAB97241.2|  731|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF106583-12|AAD03133.1|  432|Caenorhabditis elegans Hypothetical...    27   9.5  

>Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical
           protein R01E6.1 protein.
          Length = 1014

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 357 LVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIKSMD 515
           L++ P S +   ++  +    N L +KRS   + I F ND+ +QF T+IK  D
Sbjct: 816 LIMPPRSYESATVMFVQICDFNAL-MKRSSPEQVIAFLNDIYDQFDTVIKRHD 867


>AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1017

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 357 LVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIKSMD 515
           L++ P S +   ++  +    N L +KRS   + I F ND+ +QF T+IK  D
Sbjct: 819 LIMPPRSYESATVMFVQICDFNAL-MKRSSPEQVIAFLNDIYDQFDTVIKRHD 870


>Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical
           protein C38D4.5 protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -2

Query: 381 SSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLYSSFRHDSARLVFRPRK 202
           S+TP+R   +     F P   C + +       P+RT R   L  S   + A  V +P+K
Sbjct: 351 SNTPDRPILMEDSADFTPSSRCEERRGSGDGREPVRTIRCGDLERSENDEPAEKVVKPKK 410


>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
            protein 104, isoforma protein.
          Length = 1584

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 345  RSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFAN 473
            RS  L+    S  ++ + SN++I+ NL  +KRS+S   I+  N
Sbjct: 1404 RSSDLLCRQKSKSDQNLASNDDIVDNLGGMKRSLSGSRILQLN 1446


>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
            protein 104, isoformb protein.
          Length = 1628

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 345  RSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFAN 473
            RS  L+    S  ++ + SN++I+ NL  +KRS+S   I+  N
Sbjct: 1448 RSSDLLCRQKSKSDQNLASNDDIVDNLGGMKRSLSGSRILQLN 1490


>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
            protein protein.
          Length = 1584

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 345  RSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFAN 473
            RS  L+    S  ++ + SN++I+ NL  +KRS+S   I+  N
Sbjct: 1404 RSSDLLCRQKSKSDQNLASNDDIVDNLGGMKRSLSGSRILQLN 1446


>Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical
           protein C06A12.4 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 330 AEICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIKS 509
           A I +  +  V++P        +    I   ++ +KR    E I F ND+ +QF T+IK 
Sbjct: 517 ASIAKDLKNGVIAPARSYASATVMFVQICDFIVILKRRPPKEVIGFLNDIFDQFDTVIKR 576

Query: 510 MD 515
            D
Sbjct: 577 HD 578


>Z81459-1|CAB03827.3|  731|Caenorhabditis elegans Hypothetical
           protein C03H12.1 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 210 VEKLILLSRVEKNYIIAGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMK 383
           + + +     EKN I+    + LLV T A+  ++    +L  +   S PLV+S G+ K
Sbjct: 64  IAQAVARRNTEKNRILRDCGV-LLVATAALAIMIYLLLTLLGLSMPSRPLVVSKGAAK 120


>Z79604-6|CAB97241.2|  731|Caenorhabditis elegans Hypothetical
           protein C03H12.1 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 210 VEKLILLSRVEKNYIIAGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMK 383
           + + +     EKN I+    + LLV T A+  ++    +L  +   S PLV+S G+ K
Sbjct: 64  IAQAVARRNTEKNRILRDCGV-LLVATAALAIMIYLLLTLLGLSMPSRPLVVSKGAAK 120


>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
           protein K12D12.2 protein.
          Length = 1696

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 675 AVALSNIFAKKHCSRKNINWKTISFIGKSY 586
           A  L +IF+K+HC   +  W++++   K Y
Sbjct: 514 AALLYDIFSKEHCGPDSYGWESLASALKGY 543


>AF106583-12|AAD03133.1|  432|Caenorhabditis elegans Hypothetical
           protein F23C8.11 protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -3

Query: 611 Q*VLLGKVTRQS*YVTIRRLHDARKGFLTLRRIHALDHSLKLFSHVVRKHNSLIRNRPFD 432
           Q +L GK+     +V    + DA K    LRR      +L+ FSH + +  + +R   +D
Sbjct: 324 QTLLTGKIDLNDEFVASIEVEDAEKSKEILRRRRERPLALRQFSHALSRAMANLRTYHYD 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,692,418
Number of Sequences: 27780
Number of extensions: 296641
Number of successful extensions: 647
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)