Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e08
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    24   1.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.6  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 573 LLFKFGWSEEDTHK 614
           L   +GWSE+ THK
Sbjct: 12  LFVHYGWSEDTTHK 25


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 507 VLTLDVAQQWISMKHDPREPTLLLFKFGWSEEDTHKKVR 623
           VL   VA +W    ++  +  + L K   S  D HKK+R
Sbjct: 107 VLFSQVASRWPLFLNEWTKIEINLLKHYQSTTDLHKKIR 145


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 269 FDFLCVIYIYIAFFTLSEH 213
           F  LC+ Y Y AF   + H
Sbjct: 141 FFLLCIYYFYCAFIIFTVH 159



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 260 LCVIYIYIAFFTLSEH 213
           LCV Y Y AF   + H
Sbjct: 111 LCVYYFYYAFIIFTVH 126



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 260 LCVIYIYIAFFTLSEH 213
           LC+ Y Y AF   + H
Sbjct: 236 LCIYYFYYAFILFTVH 251


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 IDVTGLSNTNPPLVLTLDVAQ 530
           I VTGL   NP L + + V +
Sbjct: 236 ISVTGLKRVNPKLKVLISVGE 256



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/32 (31%), Positives = 12/32 (37%)
 Frame = -1

Query: 455 CNQIVWRYDGKMHGGFTPWKLHVHSCTQPWYA 360
           C    W +  K  G F P  +    CT   YA
Sbjct: 641 CYMTNWAFYRKAEGKFVPEHIDQRLCTHVVYA 672


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 455 CNQIVWRYDGKMHGGFTPWKLHVHSCTQPWYA 360
           C    W  +   +G FTP  +  + CT   YA
Sbjct: 25  CYYASWGANRPGNGKFTPEDIDANLCTHVNYA 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,660
Number of Sequences: 336
Number of extensions: 3247
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)