Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e08
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF014940-2|AAB63934.1|  232|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z46343-4|CAA86460.1|  336|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-...    28   5.9  
U58761-3|AAB00714.4|  456|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U29096-1|AAA68406.1|  105|Caenorhabditis elegans Neuropeptide-li...    28   7.8  

>AF014940-2|AAB63934.1|  232|Caenorhabditis elegans Hypothetical
           protein W02D7.4 protein.
          Length = 232

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = -2

Query: 673 IHSASS*LSPGISQIQLLTFLCVSSSLQPNLKSSNVGSRGSCFIEIHC*ATSKVSTKGGF 494
           IH     ++P  +++ + T +  ++  + NLK  N+   G    E    A   V  K GF
Sbjct: 132 IHREIGSVAPQFTRLGIATKMVTTNMTKRNLKKYNI---GGVLSETTSLANQIVLEKAGF 188

Query: 493 VLLR--PVTSIID---NLVTR*SGGMTERCMEASP 404
             L+  P ++I+D   N V +   G T  C+   P
Sbjct: 189 KCLKELPYSTIVDSKGNQVLKLDDGTTSLCLNFKP 223


>Z46343-4|CAA86460.1|  336|Caenorhabditis elegans Hypothetical
           protein T23F11.5 protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 269 FDFLCVIYIYIAFFTLSEHRVQ*NEIKKCDFFIEFSHFSTRILY 138
           F FL VI IY AFF+ S    +   ++   F  +  +FST I++
Sbjct: 253 FSFLSVIQIYFAFFSSSTSEWRPFLLRVMYFTYDLLNFSTTIIF 296


>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
           Immunoglobulin-like cell adhesionmolecule family protein
           1 protein.
          Length = 1073

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 464 YNRRYWPKQYKSTFSADFRCCSAMDLNE 547
           Y  + WP +  S+ S DF C S  +L E
Sbjct: 293 YQGKIWPIRVDSSMSGDFECRSTNELGE 320


>U58761-3|AAB00714.4|  456|Caenorhabditis elegans Hypothetical
           protein C01F1.6 protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -2

Query: 421 CMEASPPGSSMCIAVPSPGTPQFRHSFHRFSIAS*YSDKSLQV 293
           C    PPG  +C+ +P   T   + +F +F   +   DK   +
Sbjct: 400 CSARLPPGFPVCVEIPLLATIAAKVTFQKFQFTNDIQDKMFTI 442


>U29096-1|AAA68406.1|  105|Caenorhabditis elegans
          Neuropeptide-like protein protein32 protein.
          Length = 105

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 81 RKFKNLLVFCVLVLDALSVF 22
          R+F  LLVFC++ L AL VF
Sbjct: 2  RQFNLLLVFCLIALTALPVF 21


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,844,262
Number of Sequences: 27780
Number of extensions: 292003
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)