Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e06
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   3.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 384 KCPKAKSKMLH-EY-LQPHVTALRMSAQCNYCDFKCELESM 500
           KCP       H EY L+ H  +     QCN CD+ C  +SM
Sbjct: 235 KCPFITEYKHHLEYHLRNHAGSKPF--QCNKCDYTCVNKSM 273


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 459 QCNYCDFKCELESM 500
           QCN CD+ C  +SM
Sbjct: 18  QCNKCDYTCVNKSM 31


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 7   TVESVNDYVNLIVMTNDKIFRKQIRYSNKNPRPKP 111
           TV   N Y N I++    +F   + Y++ +  P P
Sbjct: 314 TVLKTNKYCNFIILFYLSVFVILVYYASLDETPNP 348


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 468 YCDFKCELESMKEEICVSMRKAKTDFKAYMRDPKN 572
           Y D    LE ++EE C   R    D KA    P+N
Sbjct: 170 YEDIVKHLERLREERCDPDRPLPLDQKARDLSPRN 204


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 528 KAKTDFKAYMRDPKNLELRHGVV 596
           K+   FKAY++DP  L L  G+V
Sbjct: 66  KSCRPFKAYIKDP--LTLAQGLV 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,805
Number of Sequences: 336
Number of extensions: 3718
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)