Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2e02
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F602 Cluster: Endoplasmic reticulum protein; n=1; Bom...    38   0.16 
UniRef50_Q6B969 Cluster: Nucleocapsid protein; n=92; Tospovirus|...    36   0.64 
UniRef50_A7TSV0 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_A0DX44 Cluster: Chromosome undetermined scaffold_68, wh...    34   2.6  
UniRef50_Q9U421 Cluster: P-type ATPase2; n=10; Plasmodium|Rep: P...    34   3.4  
UniRef50_Q8XLF3 Cluster: Putative uncharacterized protein CPE108...    33   4.5  
UniRef50_Q0W7B8 Cluster: Putative uncharacterized protein; n=2; ...    33   4.5  
UniRef50_Q018C1 Cluster: Chromosome 05 contig 1, DNA sequence; n...    33   6.0  

>UniRef50_Q2F602 Cluster: Endoplasmic reticulum protein; n=1; Bombyx
           mori|Rep: Endoplasmic reticulum protein - Bombyx mori
           (Silk moth)
          Length = 210

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 32/135 (23%), Positives = 64/135 (47%)
 Frame = +1

Query: 226 YYIIGIFAYFATIIYHGMYIPLQNIIRLIFSKNIYEVEKLILLSRVEKNYIIAGFSLFLL 405
           Y  IG+ A F       +     N+  +  +    E++  + L R ++N+ I GF++FL 
Sbjct: 53  YVFIGVLALFLIDAVREIR-KYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFL- 110

Query: 406 VVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETI 585
             TF ++ L++      E+ +++E ++      +E    +  +ILAN L+ +    Y+ I
Sbjct: 111 --TFVIRRLITMLIIQDELKQKAEKII---KQAEETVKQAKTSILANTLQSEELQHYDEI 165

Query: 586 MFANDMREQFKTMIK 630
              N   E+ K ++K
Sbjct: 166 ---NSQLEETKILLK 177


>UniRef50_Q6B969 Cluster: Nucleocapsid protein; n=92;
           Tospovirus|Rep: Nucleocapsid protein - Melon yellow spot
           virus
          Length = 279

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 23/83 (27%), Positives = 37/83 (44%)
 Frame = +1

Query: 382 AGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMISNENILANLLRVK 561
           A F +  L +   +   LS  ASL  +C    PLV      KE+  I N +    + ++ 
Sbjct: 140 AKFDMTALRLMLCIGGPLSLLASLHSLCPVVLPLVYFQNVKKEQLGIKNFSTYEQICKIA 199

Query: 562 RSISYETIMFANDMREQFKTMIK 630
           R +S   + F  +  E FK+ +K
Sbjct: 200 RVMSASNMTFKKEFDELFKSCVK 222


>UniRef50_A7TSV0 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 533

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
 Frame = +1

Query: 289 LQNIIRLIFSKNIYEVEKLILLSRVEK--NYIIAGFS-LFLLVVTFAVKALLSYTASLA- 456
           L N++RL+ ++ I E    + +   E+  N   +GF  L  +++    + L +   +L  
Sbjct: 343 LSNVLRLLATEIILERRSSLKIKSAEEFLNNFTSGFEYLKKIMMEHNDRQLATIQINLKK 402

Query: 457 EICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIK 630
           E+C + + +V      K KK+      L     +KR  + ETI   N+  E  KTM++
Sbjct: 403 ELCEQHDSIV-EEYEQKMKKIEKRNKSLKESFEIKRKENNETIRNINNEIEDLKTMLE 459


>UniRef50_A0DX44 Cluster: Chromosome undetermined scaffold_68, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_68,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 574

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
 Frame = +1

Query: 235 IGIFA---YFATIIYHGMYIPLQNIIR----LIFSKNIYEVEKLILLSRVEKNYIIAGFS 393
           +GIF    + A  I   ++ P+Q II     ++  +N   + K ILL++    ++     
Sbjct: 429 LGIFLGAMFIAICILILIFYPIQKIIDNCHYIMGIRNKQNMNKRILLTKFFMPFLNPQLQ 488

Query: 394 LFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMIS-NENILAN--LLRVKR 564
           L  L  T  VK  LS + +   +C+  E L   P  +K+K  +S N  +  N  L+ + +
Sbjct: 489 LLFLAYTNLVKRFLSLSHTKGSLCKTQEALQY-PKKIKQKAHLSLNRYLKKNMILIEINK 547

Query: 565 SISYETIMFANDMREQF 615
            +   +  F + +  +F
Sbjct: 548 MVFQASTYFPSQLMGRF 564


>UniRef50_Q9U421 Cluster: P-type ATPase2; n=10; Plasmodium|Rep:
           P-type ATPase2 - Plasmodium falciparum
          Length = 1555

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 220 KKYYIIGIFAYFATIIYHGMYIPLQNIIRLIFSK 321
           KK YI+GI ++F+ ++  G ++P+  I+ + F K
Sbjct: 475 KKPYIVGIISFFSWVVITGNFVPISLIVTMSFVK 508


>UniRef50_Q8XLF3 Cluster: Putative uncharacterized protein CPE1089;
           n=2; Clostridium perfringens|Rep: Putative
           uncharacterized protein CPE1089 - Clostridium
           perfringens
          Length = 154

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
 Frame = +1

Query: 205 FTKYFKKYYIIGIF----AYFATIIYHG-----MYIPLQN--IIRLIFSKNIYEVEKLIL 351
           ++KYFK+Y++I +F    A F  +I+H      +Y  L N   + +++  N+   +K I 
Sbjct: 24  YSKYFKRYFLIALFLNFLALFLGLIFHKYLDEFLYFILVNSSYLSVVYRGNLKLNDKYI- 82

Query: 352 LSRVEKNYIIAGFSLFLL-VVTFAVK 426
           L  + K ++    +LFL+ +V ++ K
Sbjct: 83  LKHLIKAFVFLSLALFLIFIVAYSFK 108


>UniRef50_Q0W7B8 Cluster: Putative uncharacterized protein; n=2;
           Archaea|Rep: Putative uncharacterized protein -
           Uncultured methanogenic archaeon RC-I
          Length = 613

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +1

Query: 223 KYYIIGIFAYFATIIYHGMYIPLQNIIRLIFSKNIYEVEKLILLSRVEKNYIIAGFSLFL 402
           KYY++ + A  A IIYH + IP   ++ L+    +Y++      S +  +Y+I   ++ L
Sbjct: 223 KYYLLALLATLAIIIYHTVSIPYV-LVMLLLMYLLYQIFAKEEKSPITYSYLIIASAMTL 281

Query: 403 L 405
           L
Sbjct: 282 L 282


>UniRef50_Q018C1 Cluster: Chromosome 05 contig 1, DNA sequence; n=2;
           Ostreococcus|Rep: Chromosome 05 contig 1, DNA sequence -
           Ostreococcus tauri
          Length = 527

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +1

Query: 433 LSYTASLAEICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFA 594
           + +   LAE+ RRS   V    + +++ ++S + +L+ L R++R   YET++ +
Sbjct: 363 IKHQDELAEVRRRSSHAVAVANTTEQELLLSRDRLLSELARMRRE-GYETVLLS 415


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,159,968
Number of Sequences: 1657284
Number of extensions: 11461640
Number of successful extensions: 29050
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29042
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)