Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d24
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 486 SCIKYDHLLGYKLELL 439
           SC++Y HL  YK E L
Sbjct: 155 SCMEYQHLHRYKEEAL 170



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 325 NWFSRTLDYPMQQRNFFHYVLWTKESPGFFVG 230
           N+++ T D P  Q+   HY  +  E P  + G
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDPYGYTG 52


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 486 SCIKYDHLLGYKLELL 439
           SC++Y HL  YK E L
Sbjct: 155 SCMEYQHLHRYKEEAL 170



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 325 NWFSRTLDYPMQQRNFFHYVLWTKESPGFFVG 230
           N+++ T D P  Q+   HY  +  E P  + G
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDPYGYTG 52


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 486 SCIKYDHLLGYKLELL 439
           SC++Y HL  YK E L
Sbjct: 155 SCMEYQHLHRYKEEAL 170



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 325 NWFSRTLDYPMQQRNFFHYVLWTKESPGFFVG 230
           N+++ T D P  Q+   HY  +  E P  + G
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDPYGYTG 52


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 316 SRTLDYPMQQRNFFHYVLWTKESPGFFVG 230
           ++ + Y ++ RN+  Y +  + S GF VG
Sbjct: 190 NQKVGYVVEGRNYRKYRVEERTSDGFIVG 218


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 427 HFIYLFMICYNYSFVNVDLEIN 362
           +FIYLF + Y Y  V+    IN
Sbjct: 149 YFIYLFTVYYIYYSVHEASIIN 170


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 134 IYYKSFICQSQNFYDYF 84
           + Y  ++CQ+ + ++YF
Sbjct: 193 VSYNIYVCQTVSNFEYF 209


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 134 IYYKSFICQSQNFYDYF 84
           + Y  ++CQ+ + ++YF
Sbjct: 119 VSYNIYVCQTVSNFEYF 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,254
Number of Sequences: 336
Number of extensions: 2364
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)