Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d23
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2845| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 35 0.069
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 34 0.12
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 32 0.37
SB_21876| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_50659| Best HMM Match : PCMT (HMM E-Value=1.8) 31 0.84
SB_41210| Best HMM Match : MAAL_N (HMM E-Value=0.7) 31 0.84
SB_9723| Best HMM Match : Ribosomal_S9 (HMM E-Value=2.1) 31 0.84
SB_6514| Best HMM Match : hATC (HMM E-Value=0.024) 31 0.84
SB_48175| Best HMM Match : hATC (HMM E-Value=0.024) 31 0.84
SB_47551| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_16944| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_3583| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_55137| Best HMM Match : hATC (HMM E-Value=0.059) 31 1.1
SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_30965| Best HMM Match : Ribosomal_S9 (HMM E-Value=9.6) 31 1.1
SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2670| Best HMM Match : zf-C2H2 (HMM E-Value=0.41) 31 1.1
SB_43296| Best HMM Match : DUF957 (HMM E-Value=4.3) 31 1.1
SB_40860| Best HMM Match : MAAL_N (HMM E-Value=0.6) 31 1.1
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_55136| Best HMM Match : DUF520 (HMM E-Value=9.8) 29 2.6
SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17) 29 2.6
SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6693| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_11871| Best HMM Match : zf-C2H2 (HMM E-Value=1.3e-13) 29 4.5
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_30373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71) 28 6.0
SB_4396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_57435| Best HMM Match : Ricin_B_lectin (HMM E-Value=1.4e-22) 28 6.0
SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.0
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10087| Best HMM Match : VWA (HMM E-Value=4.00001e-40) 28 6.0
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 28 6.0
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 7.9
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 28 7.9
SB_41186| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_14048| Best HMM Match : CBF (HMM E-Value=9.6e-17) 28 7.9
SB_9548| Best HMM Match : WD40 (HMM E-Value=0.16) 28 7.9
SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.9
SB_51780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_22531| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_4672| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_2845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/91 (28%), Positives = 44/91 (48%)
Frame = +3
Query: 294 SQNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFV 473
++ ++++ + C+ C K FS+ N++ NH+ SKKH V R +++ G
Sbjct: 27 AKEQEKNTTMRCESCCKNFSSGNAFKNHMQSKKHNEIVLRASKTSLLVRQPGNMTK---- 82
Query: 474 KVECTTGLTNERSKFVVVNTTDSGEDIETDS 566
KVE E + +V + GE IE DS
Sbjct: 83 KVEKIAKEDEEEN--MVEEDDEDGEIIEDDS 111
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 528 NTTDSGEDIETDSEIEELDSDEWDECRIQESDSLIKPRDCLFCVHHSK 671
N T E I + E E + ++ ++ I E DSL + CLFC H S+
Sbjct: 79 NMTKKVEKIAKEDEEENMVEEDDEDGEIIEDDSL-EITQCLFCPHESQ 125
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 294 SQNEKQDDSQ-YCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSF 470
SQ++++D Q YC C K F + + NH S+KHK +V E + + + G DT
Sbjct: 289 SQSDEEDVEQFYCVACDKSFKSTKALANHEKSRKHKENVALIKE-ELAKMDLGDEDTTGD 347
Query: 471 VK 476
V+
Sbjct: 348 VE 349
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 303 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSD--TDS 467
+ ++ C+ C+ F++ ++ HLN KKH++ + +K++ +S D TDS
Sbjct: 312 DADENDLLCKTCNMYFNSPHNKREHLNGKKHQMMLNTAAAEKKEKLSSSVKDKKTDS 368
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +3
Query: 303 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQS-DTDSFVKV 479
+K C+ C + + ++++ HL+ KKH V+ + ESQ G+S +++ F K
Sbjct: 351 DKGRQKYVCKVCKIMCNKEHAFRMHLHGKKH---VKTWLESQ------GKSFESEMFKKA 401
Query: 480 ECTTGLTNERSKFVVVN-TTDSGEDIETDSEIEELDSDEWDECRI-QESDSLIKPRD 644
T E S+ + TDS E +ET E E D+ E + +K D
Sbjct: 402 ALKEKATAEASETPTKSKETDSSEKMETSKEEAEQQKTAIDDASAGDEEKTEVKKED 458
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/55 (21%), Positives = 26/55 (47%)
Frame = +3
Query: 312 DDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFVK 476
D +C C K F+++ ++H + K H V+ Y K ++ + + D ++
Sbjct: 617 DPDTHCPLCKKWFNSRVQADSHYSGKAHLTQVDLYNMQPKFKKTKEEEEFDKLLE 671
>SB_21876| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 381 NSKKHKVSVERYT----ESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGE 548
N H+V V +Y ++ +N+ ++ TDS + GL FVVV T +
Sbjct: 283 NFALHRVDVAQYIIRAEKAATALKNAKETVTDSLLIAMVLKGLPESFKPFVVVITQSDKQ 342
Query: 549 DIETDSEIEELDSDEWDECRIQESDSLIKPRD 644
T+ ++ ++ ++ R E DS++K ++
Sbjct: 343 QTFTEFKVALRSFEDTEKSRTTEMDSVMKTKN 374
>SB_50659| Best HMM Match : PCMT (HMM E-Value=1.8)
Length = 398
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 102
>SB_41210| Best HMM Match : MAAL_N (HMM E-Value=0.7)
Length = 536
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 102
>SB_9723| Best HMM Match : Ribosomal_S9 (HMM E-Value=2.1)
Length = 387
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGELFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 102
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 309 KDGELFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 353
>SB_6514| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 102
>SB_48175| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 102
>SB_47551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 107 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 151
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 312 DDSQY-CQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFV-KVEC 485
D S Y C CSK F S + HL K + E+Q+ + S S T+ F + C
Sbjct: 52 DSSAYQCNNCSKAFDNSASLSRHLGWHGRKTPNKH--ETQEVKATSSPSTTEPFAHQCTC 109
Query: 486 TTGLTNERSKFV 521
+ N S+F+
Sbjct: 110 CSKKFNNSSRFL 121
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 327 CQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFVK--VECTTGLT 500
C CCSK F+ + + H+ + R +S ++E + S T+S V +C+ +
Sbjct: 107 CTCCSKKFNNSSRFLKHMTWH----TKTRRLDSPPEEERASPSTTESAVYQCTQCSKSFS 162
Query: 501 NERS 512
N S
Sbjct: 163 NSSS 166
>SB_16944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 102
>SB_3583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 880
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 57 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKLKKSKLKDQ 101
>SB_55137| Best HMM Match : hATC (HMM E-Value=0.059)
Length = 619
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKRKKSKLKDQ 102
>SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +3
Query: 438 ENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQE 617
+N G D D V + + ++ + FVV++ D +D + D + + D ++ D+ +
Sbjct: 25 DNDGDDDVDDDVVYDDVGDIADDDNAFVVLDDDDDDDDDDDDDDDDNDDDNDDDDDNDDD 84
Query: 618 SD 623
D
Sbjct: 85 DD 86
>SB_30965| Best HMM Match : Ribosomal_S9 (HMM E-Value=9.6)
Length = 140
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 32 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKRKKSKLKDQ 76
>SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +3
Query: 411 RYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSD 590
R ++ K +N+ ++ TDS + GL FVVV T + T+ + +
Sbjct: 278 RAEKAAKALKNAKETVTDSLLIAMVLKGLPESFKPFVVVITQSDKQQTFTEFMVALRSFE 337
Query: 591 EWDECRIQESDSLIKPRD 644
+ ++ R E DS++K ++
Sbjct: 338 DTEKSRTTEMDSVMKTKN 355
>SB_2670| Best HMM Match : zf-C2H2 (HMM E-Value=0.41)
Length = 113
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 324 YCQCCSKLFSTKNSYNNHLNSKKH 395
YC+ C K + Y+NH+NS H
Sbjct: 86 YCELCDKQYFKYKEYDNHINSYDH 109
>SB_43296| Best HMM Match : DUF957 (HMM E-Value=4.3)
Length = 447
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 534 TDSGEDIETDSEIEELDSDE 593
T SGED+E +S ELDSDE
Sbjct: 320 TSSGEDVEVESSSGELDSDE 339
>SB_40860| Best HMM Match : MAAL_N (HMM E-Value=0.6)
Length = 538
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTTHLASKKHGNGKEKRKKSKLKDQ 102
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 294 SQNEKQDDSQYCQCCSKLFSTKNSYNNHL 380
SQN + +C+ C+K F+ K+ YN HL
Sbjct: 420 SQNHENGKKFFCKFCAKGFNRKDVYNVHL 448
>SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1395
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +3
Query: 327 CQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFVK 476
C C +LF + +HL + K ++ ++TE K +++ D+F +
Sbjct: 1109 CPQCPRLFRAQIGLISHLRTHKRVLAANKWTEFPKFNSPEAKAELDAFAE 1158
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+D +C C ++ S+K S HL SKKH E +S+ KDQ
Sbjct: 58 KDGKLFCLACREIVSSKKSILTKHLASKKHGNGKETLKKSKLKDQ 102
>SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1900
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 303 EKQDDSQYCQC----CSKLFSTKNSYNNHLNSKKHKVSVERYTESQ 428
E +D + + C C+K F + S +HL+S KH + +ER + Q
Sbjct: 1294 EGRDRTAFFSCPEKGCTKQFLSHRSLQSHLDSGKHHLRLERESSEQ 1339
>SB_55136| Best HMM Match : DUF520 (HMM E-Value=9.8)
Length = 158
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 324 YCQCCSKLFSTKNSY-NNHLNSKKHKVSVERYTESQ-KDQ 437
+C C ++ S+K S HL SKKH E+ +S+ KDQ
Sbjct: 55 FCLACREIVSSKKSILTTHLASKKHGNGKEKQKKSKLKDQ 94
>SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17)
Length = 232
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 546 EDIETDSEIEELDSDEWDECRIQESDSLIKP 638
ED+E EE +DE DEC SD +I P
Sbjct: 70 EDLEEGEVTEEDSADEMDECFKFRSDEIIDP 100
>SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/81 (17%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 351 STKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFVK-VECTTGLTNERSKFVVV 527
+ KN+YNN+ N+ + + + + N+ ++ ++ +K N ++
Sbjct: 32 NNKNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNNKNNNNNN 91
Query: 528 NTTDSGEDIETDSEIEELDSD 590
N ++ +D + D ++++ D D
Sbjct: 92 NNNNNNDDDDDDDDVDDGDDD 112
>SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 303 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHK 398
E++ +S +C C K+F + +H+ K+HK
Sbjct: 208 EEKLESLHCLYCEKVFKDRQILKDHMRKKQHK 239
>SB_25228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 375 HLNSKKHKVSVERYTESQKDQEN--SGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGE 548
H K K S + KD N SG D +++ T E+ + TDSG+
Sbjct: 19 HEEESKKKKSENDLNDFDKDDSNDMSGNVHFDFARELKKTK---KEKKSDDGSSGTDSGD 75
Query: 549 DIETDSEIEELDSDEWD 599
++ DSE EE D ++ +
Sbjct: 76 ELNDDSEAEEFDYEDME 92
>SB_6693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 375 HLNSKKHKVSVERYTESQKDQEN--SGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGE 548
H K K S + KD N SG D +++ T E+ + TDSG+
Sbjct: 456 HEEESKKKKSENDLNDFDKDDSNDMSGNVHFDFARELKKTK---KEKKSDDGSSGTDSGD 512
Query: 549 DIETDSEIEELDSDEWD 599
++ DSE EE D ++ +
Sbjct: 513 ELNDDSEAEEFDYEDME 529
>SB_51551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 420 ESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDE 593
++ D ++ G D D VE T ++ + D G+DIE D E+++ D D+
Sbjct: 197 DADGDADDDGNDDEDD---VEVDTNADDDGGDDATAD--DDGDDIEADVEVDKNDDDD 249
>SB_11871| Best HMM Match : zf-C2H2 (HMM E-Value=1.3e-13)
Length = 774
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +3
Query: 309 QDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTD 464
++ + C C K F + HL K K + +S D E+ G+ D
Sbjct: 712 KEKAHTCHVCGKAFGRSDHLTKHLRIHKAKGQLANQPQSDTDAESIGEELED 763
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 321 QYCQCCSKLFSTKNSYNNHLNSKKH 395
QYC C + F T+ + NH K H
Sbjct: 312 QYCDECHRYFRTQTCFENHRRVKPH 336
>SB_30373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 516 FVVVNTTDSGEDIETDSEIEELDSDEWDE 602
FV DSGED E+DS+ +E +SDE +E
Sbjct: 287 FVGSEEKDSGEDKESDSD-DESESDESEE 314
>SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71)
Length = 1139
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +3
Query: 357 KNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFVKVECTTG--LTNERSKFVVVN 530
K SY +SK + + + +++ GQ + ++ E G +TN+ V +
Sbjct: 535 KESYKKLASSKGSQRGISSQIINSANRDTGGQVNCENCDMKETAQGNFITNDD---VAAD 591
Query: 531 TTDSGEDIETDSEIEELDSDEWDECRIQESDSLIKPRDC 647
D +D D + ++ D D+ D+ + D R C
Sbjct: 592 DEDDNDDNADDDDDDDDDDDDDDDDDDDDDDIFCTARSC 630
>SB_4396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 46 NYLHEVKTPPKLKRNIYAANIVI 114
NYLHE K P + R+I +AN+++
Sbjct: 420 NYLHENKPTPIIHRDISSANVLL 442
>SB_57435| Best HMM Match : Ricin_B_lectin (HMM E-Value=1.4e-22)
Length = 472
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 441 NSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEI--EELDSDEWDECRIQ 614
NS +TD F + E TG TN+ D E+ ET EI E + +E+D+ +I
Sbjct: 34 NSSPQETDIFTRDEAQTGPTNQ----------DLQENQETSREIPKEREEEEEFDKRKIS 83
Query: 615 ESDSL 629
+ D +
Sbjct: 84 DLDPI 88
>SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +3
Query: 444 SGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEW 596
+G++ D+ E T + + R+ VV+N ++S +D + D + +++D DE+
Sbjct: 159 AGETKRDT-ASAENTRAVRSTRN--VVINFSESDDDNDLDDDDDDIDDDEY 206
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 327 CQCCSKLFSTKNSYNNHLNS 386
C+ C K FS++ S+ HLNS
Sbjct: 324 CETCGKRFSSQGSFKIHLNS 343
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 417 TESQKDQENSGQSDTDSFVK-VECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDS-- 587
T + +QEN + K +ECT LT S + + D +ETD I+ L S
Sbjct: 735 TALEWEQENFTLKKEEPVEKGMECTQNLTFAVSGEITPSAIDRTGRLETDMGIDSLQSRN 794
Query: 588 -DEWDECRIQESDSLIK 635
DE + + DS IK
Sbjct: 795 ADETESSLRLDRDSFIK 811
>SB_10087| Best HMM Match : VWA (HMM E-Value=4.00001e-40)
Length = 357
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/48 (25%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +3
Query: 462 DSFVKVECTTGLTNE---RSKFVV-VNTTDSGEDIETDSEIEELDSDE 593
+ F ++E TTG + + K+ +N+ ++G+D++ D + ++ D D+
Sbjct: 306 EHFSQIESTTGAVEDEICKGKYPKNINSNNNGDDVDNDDDDDDDDDDD 353
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/111 (21%), Positives = 41/111 (36%)
Frame = +3
Query: 294 SQNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFV 473
S N QD+S +T NS +++ N+ S D S S+TD+
Sbjct: 130 SNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSG 189
Query: 474 KVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQESDS 626
++G N + +T+D+ + S+ D+ D S S
Sbjct: 190 SDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTS 240
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 345 LFSTKNSYNNHLNSKKHKVSVERYTESQKDQENSGQ 452
L + NSY N + + K +V V RY+ +K ++ Q
Sbjct: 1159 LMGSTNSYANEMTTLKKEVEVTRYSNQEKVRDLQDQ 1194
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/132 (17%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = +3
Query: 207 HRYNLKRKVASIEPVTLXXXXXXXXXXXXSQNEKQDDSQYCQCCSKLFSTKNSYNNHLNS 386
H + L+ + E +L + EK+ + + + + +S
Sbjct: 510 HFHELQEEAEKNETQSLFFFQQGSAEAKKKREEKEGKKRRKEGVKECKGEEEQNKTDSSS 569
Query: 387 KKHKVSVERYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIE--- 557
++ + +E +S + ++ ++D K E + + + S+ +++DSG+D +
Sbjct: 570 EESEDELETSDDSSSSESDTSDDESDDDHKSE-KSSIATDTSEHPSDSSSDSGDDSDDES 628
Query: 558 TDSEIEELDSDE 593
+DS+ E DSD+
Sbjct: 629 SDSDDEPSDSDD 640
>SB_41186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 294 SQNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHK 398
S + Q YC C + ++ +H+N KKH+
Sbjct: 73 SSSMSQTGGYYCNVCDCVVKDSINFLDHINGKKHQ 107
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 474 KVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELD 584
KVE L +RSK V ++ SG+ + +D+E EE+D
Sbjct: 671 KVESRESLDKKRSK--VKSSKTSGKPVHSDTESEEVD 705
>SB_14048| Best HMM Match : CBF (HMM E-Value=9.6e-17)
Length = 573
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 534 TDSGEDIETDSEIEELDSDEWD 599
TDSG+++ DSE EE D ++ +
Sbjct: 524 TDSGDELNDDSEAEEFDYEDME 545
>SB_9548| Best HMM Match : WD40 (HMM E-Value=0.16)
Length = 417
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 420 ESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGED--IETDSEIEELDSDE 593
+S++ + ++ + + + RS V T +SGED I T S+ E D +E
Sbjct: 296 QSRRSSRQASRARERARTRARTQRAMYATRSAMSVEETEESGEDEVIVTPSDSE--DEEE 353
Query: 594 WDECRIQESD 623
W+E + S+
Sbjct: 354 WNESSSESSE 363
>SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +3
Query: 330 QCCSKLFST--KNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFVKVECTTGLTN 503
QC ++ ST K YN N++ + Y E D ++ ++ E T T
Sbjct: 231 QCAPQMASTSSKGVYNTEYNNEYNTEYNNEYNEYNNDYNTEYNNEYNTEYNTEYNTEYTE 290
Query: 504 ERSKFVVVNTTDSGEDIETDSEIE 575
+++ TD + T+ E
Sbjct: 291 YNTEYNTEYNTDYNTEYNTEYNTE 314
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 327 CQCCSKLFSTKNSYNNHLNS 386
C CC+K+F + Y++HL +
Sbjct: 970 CPCCNKVFLKQRQYSHHLRT 989
>SB_51780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 426 QKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDS-GEDIETDSEIEELDSDEWDE 602
+K + + D DS + ++ G+ + +F + G D+ S EELD DE E
Sbjct: 415 KKKELHRNNLDEDSIISLKELRGVFKKPLEFTQKDAEMLFGPDVNYRSAFEELDKDEDGE 474
Query: 603 CRIQESDSLIKPR 641
QE + I+ +
Sbjct: 475 ITFQELMAFIEKK 487
>SB_22531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 327 CQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKDQE--NSGQSDTDSFVKVE 482
C+ C K F TK S HL+ K K + Y ++D + + SD+ S +VE
Sbjct: 445 CKDCDKRFGTKRSLFGHLSVCKRK---KGYINEERDLDAIEANASDSASVNQVE 495
>SB_4672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 327 CQCCSKLFSTKNSYNNHLNSKKHKVSVERYTESQKD 434
C CCS+ F + ++ NHL++ + ++ E K+
Sbjct: 77 CACCSRRFKSADTLGNHLSTPQTIINNTEIDEELKN 112
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,044,993
Number of Sequences: 59808
Number of extensions: 309790
Number of successful extensions: 1382
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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