Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d23
         (671 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      29   0.053
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    28   0.070
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    28   0.093
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              26   0.28 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    25   0.87 
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               24   1.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   2.6  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   6.1  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   6.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 0.053
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 315 DSQYCQCCSKLFSTKNSYNNH 377
           +S  C  C K+F T NS NNH
Sbjct: 400 NSAVCALCHKVFRTLNSLNNH 420


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 297 QNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVS 404
           ++E+ D    C+ C++ + TKNS   H  S +H+ S
Sbjct: 28  KHEQSDTLYVCEFCNRRYRTKNSLTTH-KSLQHRGS 62


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 309 QDDSQYCQCCSKLFSTKNSYNNHLNS 386
           ++ +  C  C K F  KN Y +HL S
Sbjct: 58  EEKTYQCLLCQKAFDQKNLYQSHLRS 83


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +3

Query: 303 EKQDDSQYCQCCSKLFS---TKNSYNNHLNSKKHKVSVERYTESQKDQENSGQSDTDSFV 473
           E ++   Y +C  K FS      ++N H++ +  K+ +     +Q   E S  SDT+  +
Sbjct: 55  EDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEINQLITECSAISDTNVHL 114

Query: 474 KV 479
           K+
Sbjct: 115 KI 116


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 327 CQCCSKLFSTKNSYNNHLNSKKHKVSVERY 416
           CQ C K+  +K S   H+ + KH    E Y
Sbjct: 8   CQLCGKVLCSKASLKRHV-ADKHAERQEEY 36


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 546 EDIETDSEIEELDSDEWDECRIQESDSLIKPRDCL-FCVHH 665
           +DI    + E L+ D+ D     ES+ +++ R C+  C+ H
Sbjct: 22  DDITLCLKQENLNLDDIDSLLEDESERMLRKRGCIEACLFH 62


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 330 QCCSKLFSTKNSYNNH--LNSKKHKVSVERYTESQKDQENSGQSDT 461
           Q   +LF  KN+ NN   + SKK + + E   +  ++ E   + DT
Sbjct: 137 QGLERLFDEKNAGNNKITMKSKKEQNAEEDIVDPVEENETYDEFDT 182


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 452 LTAVLLILLTFCVSFNTHFVFLTIQMIVI 366
           LT ++ I LT+ V F T FV   I  IVI
Sbjct: 30  LTLIVPITLTYVVIFVTGFVGNIITCIVI 58


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 178 NSDVLNNTLQVMHENIVIL 122
           N +VLNN L + H N  IL
Sbjct: 383 NQNVLNNDLNLEHVNFQIL 401


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 464 VCIRLTAVLLILLTFCV 414
           +C RL  +LLI   FCV
Sbjct: 4   ICSRLGRILLISAVFCV 20


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/42 (21%), Positives = 26/42 (61%)
 Frame = +3

Query: 390 KHKVSVERYTESQKDQENSGQSDTDSFVKVECTTGLTNERSK 515
           + + S +RY+ S++ ++NS +++ +     E + G + +R++
Sbjct: 253 EERTSRKRYSRSREREQNSYKNEREYRKYRETSKGRSRDRTE 294


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/42 (21%), Positives = 26/42 (61%)
 Frame = +3

Query: 390 KHKVSVERYTESQKDQENSGQSDTDSFVKVECTTGLTNERSK 515
           + + S +RY+ S++ ++NS +++ +     E + G + +R++
Sbjct: 264 EERTSRKRYSRSREREQNSYKNEREYRKYRETSKGRSRDRTE 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,618
Number of Sequences: 438
Number of extensions: 3138
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)