Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d20
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -2

Query: 126 NVMVKIASFRLFKIENNLTNE*IESNQHVFFVVVNDILIFFF 1
           N  ++I + RLFKI+N+L  + +      F V++ D+ +  +
Sbjct: 196 NDKLEITACRLFKIDNSLILDLLVFITINFVVLLGDLYVTLY 237


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -1

Query: 589 FTIGVEITTKYRTHVFAEH*CRMIFRGF 506
           + + + I   Y  ++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -1

Query: 589 FTIGVEITTKYRTHVFAEH*CRMIFRGF 506
           + + + I   Y  ++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -1

Query: 589 FTIGVEITTKYRTHVFAEH*CRMIFRGF 506
           + + + I   Y  ++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -1

Query: 589 FTIGVEITTKYRTHVFAEH*CRMIFRGF 506
           + + + I   Y  ++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 596 VTGGEDDKAYVWSVESG 646
           V+   DD+ YVW   +G
Sbjct: 144 VSKNNDDEQYVWESSAG 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,308
Number of Sequences: 336
Number of extensions: 2526
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)