Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d20
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 38 0.001
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 37 0.003
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 36 0.005
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 36 0.005
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 36 0.007
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 35 0.009
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 35 0.009
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 35 0.009
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 34 0.021
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 33 0.049
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 32 0.065
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 31 0.11
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.11
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 31 0.20
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 30 0.26
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 0.61
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 29 0.61
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 0.61
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 29 0.80
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 29 0.80
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 29 0.80
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 28 1.1
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 28 1.4
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 1.8
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 27 1.8
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 1.8
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 1.8
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 27 1.8
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 27 1.8
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 27 2.4
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 27 2.4
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 27 3.2
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 4.3
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 26 4.3
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 26 4.3
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 4.3
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 26 5.6
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 25 9.9
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 25 9.9
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 25 9.9
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 25 9.9
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 25 9.9
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 9.9
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHEC 664
VF H G V C +H +G +GG+D +W V +G V +C
Sbjct: 374 VFIGHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTGRCVWKC 417
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
VF+ H+ V C HPN +TG D +W V G V
Sbjct: 458 VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSV 498
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
H G V+ P+ K ++ ED A +WSV++
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDT 410
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = +2
Query: 521 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
HS VF+ H V + P+G + + ++W + +G
Sbjct: 496 HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTG 537
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
H SV HPNG + TGG+D A VW + +
Sbjct: 299 HSDSVLTGSWHPNGNILATGGQDTTAKVWDIRA 331
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
VFS H ++ D NG+ V+G D A +W VE+G +
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCI 437
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 524 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
S L H SV P+G+ +G D +A +WS++
Sbjct: 572 SYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 578 PNGKLAVTGGEDDKAYVWSVESGXV 652
P+GK VTG ED + +W + + V
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKV 394
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 35.5 bits (78), Expect = 0.007
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
VF H V C HPN TG D +W V +G V
Sbjct: 482 VFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTV 522
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 35.1 bits (77), Expect = 0.009
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
V HVG V+ ++P+ + ++ G D K +W++ESG ++
Sbjct: 612 VLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELL 652
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 35.1 bits (77), Expect = 0.009
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHE 661
+ H G+++ CD++ + L V+G D+ +W V++G +++
Sbjct: 48 YEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTGKQLYK 89
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 35.1 bits (77), Expect = 0.009
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHP-NGKLAVTGGEDDKAYVWSVESG 646
F +H SVF ++P + L +GG DD Y+W + +G
Sbjct: 57 FFEHKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTG 94
Score = 28.7 bits (61), Expect = 0.80
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
++ H + C + P+GK VTG +D + V+ E
Sbjct: 364 YTGHQEPILCMAITPDGKRVVTGSDDTELLVFDCE 398
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 575 HPNGKLAVTGGEDDKAYVWSVESGXVV 655
HP G G D ++WS+ SG VV
Sbjct: 155 HPKGLFLAAGCNDGSIWMWSLPSGKVV 181
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 521 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
HS L H SV + PNG TG D +A +WS E
Sbjct: 545 HSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 584
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H ++ D +GK V+G D +W VE+G
Sbjct: 375 HEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 408
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
F+ H + + P+GK ++G +D WS +S
Sbjct: 508 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDS 543
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
H SV+ P+GK V+G D+ +W ++
Sbjct: 457 HEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 488
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 32.7 bits (71), Expect = 0.049
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
H S+F +HP+G TGG D +WS E+
Sbjct: 17 HRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEA 49
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 539 SKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
S H G+V PNG+ +G +D +W E
Sbjct: 71 STHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKE 104
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 32.3 bits (70), Expect = 0.065
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
V S H+G V C D+ P + TG D +W + SG
Sbjct: 158 VISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASG 195
Score = 32.3 bits (70), Expect = 0.065
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H+ V+ LHP + VT G D A VW + + VH
Sbjct: 246 HLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVH 283
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
F H G V HP L V+GG+D K VW+ +S
Sbjct: 49 FDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKS 84
Score = 30.7 bits (66), Expect = 0.20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 637
H +V CC HP+ +L ++ ED VW +
Sbjct: 255 HFNNVSCCLFHPHQELILSASEDKTIRVWDL 285
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 637
+ + H V C HP+ L V+ D VW +
Sbjct: 132 ILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDI 166
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
KH V C LH + K ++G D Y W + +G +
Sbjct: 230 KHTAPVSCLALHGSEKKVLSGSWDKMVYYWDLNTGDAI 267
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 521 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHEC 664
H VF + + C P+GK GG+DD ++S +V C
Sbjct: 355 HVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSFPLRKLVARC 402
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 30.3 bits (65), Expect = 0.26
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 563 CCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
C D PNG+ V+G + + ++ S E+G + H
Sbjct: 150 CIDYSPNGRFIVSGHQTGQLFLISTETGRLFH 181
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 29.1 bits (62), Expect = 0.61
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 634
H VF D P+G+ +GG D +WS
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
HV +V+ C + +L V+ +D VW V S
Sbjct: 430 HVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS 462
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 29.1 bits (62), Expect = 0.61
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 575 HPNGKLAVTGGEDDKAYVWSVESGXV 652
HP+GK + G Y+W +ES V
Sbjct: 270 HPDGKRVIAAGRRKYMYIWDLESAQV 295
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 0.61
Identities = 11/45 (24%), Positives = 18/45 (40%)
Frame = +2
Query: 524 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
S +V +H+ + PNG T DD +W + + H
Sbjct: 341 SIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAH 385
Score = 28.7 bits (61), Expect = 0.80
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H +F P+G L +GG D +W + SG
Sbjct: 306 HSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSG 339
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.7 bits (61), Expect = 0.80
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHP-NGKLAVTGGEDDKAYVWSVESGXVVHE 661
+F H +V D +P + ++ +GG+D K +W V V E
Sbjct: 76 LFRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVME 119
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 28.7 bits (61), Expect = 0.80
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = +2
Query: 545 HVGSVFCCD-----LHPNGKLA-VTGGEDDKAYVWSVESG 646
H SV C D L P G++ VTG +D + W V++G
Sbjct: 216 HADSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWDVKTG 255
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 28.7 bits (61), Expect = 0.80
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
V+ HV +V D P G+ V+G D +++V G
Sbjct: 268 VYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREG 305
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 311 DSLIRTVIQSVNMHGNEQNTPPSSLNGDEITSM 409
DS+ ++I V+ +G+ Q PPS ++ SM
Sbjct: 245 DSMSMSIISKVSSYGSRQTYPPSGIDDSSYCSM 277
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 637
H G V + P+G L +GG D +W +
Sbjct: 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDL 221
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 530 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
L + H G V C + PNG + G D +W S
Sbjct: 215 LKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTS 252
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 530 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXV 652
+ F H +V H +GK T ED VW + + V
Sbjct: 77 MTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSV 117
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHE 661
KH SV CC P+G +TG D WS+ +G ++++
Sbjct: 294 KHGFSVSCCCWLPDGLSFITGSPDCHITHWSL-NGEILYK 332
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 596 VTGGEDDKAYVWSVESGXVV 655
++G EDDK +W ESG ++
Sbjct: 444 LSGSEDDKIRIWHRESGKLL 463
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
H GSV C D L V+G D +W
Sbjct: 260 HSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H G V CC +G L +TG D W +E +
Sbjct: 105 HAGFVSCCKYVDDGHL-LTGSGDKTCMFWDIEQAKAI 140
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 572 LHPNGKLAVTGGEDDKAYVWSVESG 646
+HP+ KLA+T G D K +W + G
Sbjct: 128 VHPSEKLALTVGGDGKLRLWDLVRG 152
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 527 ALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
A FS H V C D P VT +D AYV+
Sbjct: 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 554 SVFCCDLHPNGKLAVTGGEDDKAYVWS 634
++ D HPN L G D KAYV S
Sbjct: 148 TILSLDWHPNNVLLAAGCADRKAYVLS 174
>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 612
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 542 KHVGSVFCCDLHPN 583
KHVG VFCC L N
Sbjct: 301 KHVGKVFCCSLPGN 314
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H ++ +G+ +TG +D K VW + SG +
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCI 374
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 637
H G V D +G+ ++G +D + VW V
Sbjct: 44 HTGCVNTLDWSADGEFLLSGSDDTRLIVWDV 74
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 4.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 584 GKLAVTGGEDDKAYVWSVESGXVVHE 661
GK + G + +W+V+SG +HE
Sbjct: 26 GKYVLAAGNERVVRLWNVKSGACIHE 51
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/38 (28%), Positives = 14/38 (36%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H V + P L TGG + VW + V H
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTH 139
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHECVN 670
V H V D +G TG +D+ +W++ V++C++
Sbjct: 359 VLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIH 404
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +2
Query: 524 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
S VF H + P G ++G D VW+++ V
Sbjct: 181 SMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAV 224
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/39 (25%), Positives = 16/39 (41%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHE 661
H GS+F P+ VT +W +G ++ E
Sbjct: 230 HKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSLIRE 268
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 539 SKHVGSVFCCDLH--PNGKLAVTGGEDDKAYVWSVESGXVVHE 661
S V S F D+ PN + + G D K YV+ ++G V+E
Sbjct: 184 SLRVHSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYE 226
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHE 661
VF +H V NG+ TG +WS ++ + E
Sbjct: 470 VFMRHTAPVSALSFSHNGRYLATGDTSGGVCIWSCKTAKLFKE 512
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 452 PVHPFRPGKLRPHPPY 405
P P P ++PHPPY
Sbjct: 147 PTSPHPPSFVQPHPPY 162
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H G V + + L ++G +D +WS+E+ +H
Sbjct: 391 HTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLH 428
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 539 SKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
S H S+ C ++ ++GG D ++++ VVH
Sbjct: 247 SNHQKSITCLAMNSENTRLLSGGLDGHVKIYNISDWKVVH 286
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 634
H SV C + PN + T D +WS
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWS 82
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
F H + +L + +L +TG +D V+ VES +V+
Sbjct: 86 FHAHNAMLLSAELSQDERLFITGADDKSLKVFDVESIDLVN 126
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 578 PNGKLAVTGGEDDKAYVWSV 637
P G L VTGG D VW +
Sbjct: 556 PKGNLFVTGGSDGIVKVWDL 575
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,345,581
Number of Sequences: 5004
Number of extensions: 38646
Number of successful extensions: 171
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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